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Instar- and host-associated differentiation of bacterial communities in the Mediterranean fruit fly Ceratitis capitata.地中海实蝇 Ceratitis capitata 中与龄期和宿主相关的细菌群落的分化。
PLoS One. 2018 Mar 8;13(3):e0194131. doi: 10.1371/journal.pone.0194131. eCollection 2018.
2
Revealing the gut bacteriome of Dendroctonus bark beetles (Curculionidae: Scolytinae): diversity, core members and co-evolutionary patterns.揭示树皮甲虫(Curculionidae: Scolytinae)肠道细菌组:多样性、核心成员和共进化模式。
Sci Rep. 2017 Oct 24;7(1):13864. doi: 10.1038/s41598-017-14031-6.
3
Optimization of a metatranscriptomic approach to study the lignocellulolytic potential of the higher termite gut microbiome.优化宏转录组学方法以研究高等白蚁肠道微生物群的木质纤维素分解潜力。
BMC Genomics. 2017 Sep 1;18(1):681. doi: 10.1186/s12864-017-4076-9.
4
Influence of Host Plant on Thaumetopoea pityocampa Gut Bacterial Community.寄主植物对松毛虫肠道细菌群落的影响。
Microb Ecol. 2018 Feb;75(2):487-494. doi: 10.1007/s00248-017-1019-6. Epub 2017 Jul 22.
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High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia.高分辨率宏转录组学揭示了西澳大利亚蚊子相关RNA病毒的生态动态。
J Virol. 2017 Aug 10;91(17). doi: 10.1128/JVI.00680-17. Print 2017 Sep 1.
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Gut microbiota of the pine weevil degrades conifer diterpenes and increases insect fitness.松墨天牛的肠道微生物群可降解针叶树二萜并提高昆虫的适应性。
Mol Ecol. 2017 Aug;26(15):4099-4110. doi: 10.1111/mec.14186. Epub 2017 Jun 19.
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Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory.小菜蛾肠道微生物组的宏基因组测序揭示了食草动物全生物的关键适应性。
Front Microbiol. 2017 Apr 26;8:663. doi: 10.3389/fmicb.2017.00663. eCollection 2017.
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A Metabarcoding Survey on the Fungal Microbiota Associated to the Olive Fruit Fly.与橄榄果蝇相关的真菌微生物群的宏条形码调查
Microb Ecol. 2017 Apr;73(3):677-684. doi: 10.1007/s00248-016-0864-z. Epub 2016 Sep 29.
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Bacterial diversity of the American sand fly Lutzomyia intermedia using high-throughput metagenomic sequencing.利用高通量宏基因组测序技术分析美洲沙蝇中间卢氏沙蝇的细菌多样性
Parasit Vectors. 2016 Aug 31;9(1):480. doi: 10.1186/s13071-016-1767-z.
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Rapid identification of the botanical and entomological sources of honey using DNA metabarcoding.利用DNA宏条形码技术快速鉴定蜂蜜的植物和昆虫来源。
Food Chem. 2017 Jan 1;214:183-191. doi: 10.1016/j.foodchem.2016.07.077. Epub 2016 Jul 12.

昆虫-微生物相互作用领域的元组学工具

Meta-Omics Tools in the World of Insect-Microorganism Interactions.

作者信息

Malacrinò Antonino

机构信息

Department of Physics, Chemistry and Biology (IFM), Linköping University, 58183 Linköping, Sweden.

出版信息

Biology (Basel). 2018 Nov 27;7(4):50. doi: 10.3390/biology7040050.

DOI:10.3390/biology7040050
PMID:30486337
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6316257/
Abstract

Microorganisms are able to influence several aspects of insects' life, and this statement is gaining increasing strength, as research demonstrates it daily. At the same time, new sequencing technologies are now available at a lower cost per base, and bioinformatic procedures are becoming more user-friendly. This is triggering a huge effort in studying the microbial diversity associated to insects, and especially to economically important insect pests. The importance of the microbiome has been widely acknowledged for a wide range of animals, and also for insects this topic is gaining considerable importance. In addition to bacterial-associates, the insect-associated fungal communities are also gaining attention, especially those including plant pathogens. The use of meta-omics tools is not restricted to the description of the microbial world, but it can be also used in bio-surveillance, food safety assessment, or even to bring novelties to the industry. This mini-review aims to give a wide overview of how meta-omics tools are fostering advances in research on insect-microorganism interactions.

摘要

微生物能够影响昆虫生活的多个方面,而且随着研究日益证明这一点,这种说法越来越有说服力。与此同时,新的测序技术现在每碱基成本更低,生物信息学程序也变得更加用户友好。这引发了对研究与昆虫尤其是经济上重要的害虫相关的微生物多样性的巨大努力。微生物组的重要性已在广泛的动物中得到广泛认可,对于昆虫来说,这个话题也变得相当重要。除了细菌共生体,与昆虫相关的真菌群落也越来越受到关注,尤其是那些包括植物病原体的群落。元组学工具的使用不仅限于描述微生物世界,还可用于生物监测、食品安全评估,甚至为该行业带来新事物。本综述旨在全面概述元组学工具如何推动昆虫与微生物相互作用研究的进展。