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Int J Mol Sci. 2017 Nov 18;18(11):2440. doi: 10.3390/ijms18112440.
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Mirnovo: genome-free prediction of microRNAs from small RNA sequencing data and single-cells using decision forests.Mirnovo:利用决策森林从小RNA测序数据和单细胞中进行无基因组的微小RNA预测。
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参与赋予作物耐热性的微小RNA组。

miRNomes involved in imparting thermotolerance to crop plants.

作者信息

Gahlaut Vijay, Baranwal Vinay Kumar, Khurana Paramjit

机构信息

1Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, New Delhi, 110021 India.

Department of Botany, Swami Devanand Post Graduate College, Math-lar, Lar, Deoria, Uttar Pradesh 274502 India.

出版信息

3 Biotech. 2018 Dec;8(12):497. doi: 10.1007/s13205-018-1521-7. Epub 2018 Nov 24.

DOI:10.1007/s13205-018-1521-7
PMID:30498670
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6261126/
Abstract

Thermal stress is one of the challenges to crop plants that negatively impacts crop yield. To overcome this ever-growing problem, utilization of regulatory mechanisms, especially microRNAs (miRNAs), that provide efficient and precise regulation in a targeted manner have been found to play determining roles. Besides their roles in plant growth and development, many recent studies have shown differential regulation of several miRNAs during abiotic stresses including heat stress (HS). Thus, understanding the underlying mechanism of miRNA-mediated gene expression during HS will enable researchers to exploit this regulatory mechanism to address HS responses. This review focuses on the miRNAs and regulatory networks that were involved in physiological, metabolic and morphological adaptations during HS in plant, specifically in crops. Illustrated examples including, the miR156-SPL, miR169-NF-YA5, miR395-APS/AST, miR396-WRKY, etc., have been discussed in specific relation to the crop plants. Further, we have also discussed the available plant miRNA databases and bioinformatics tools useful for miRNA identification and study of their regulatory role in response to HS. Finally, we have briefly discussed the future prospects about the miRNA-related mechanisms of HS for improving thermotolerance in crop plants.

摘要

热胁迫是农作物面临的挑战之一,对作物产量产生负面影响。为了克服这一日益严重的问题,人们发现利用调控机制,特别是以靶向方式提供高效精确调控的微小RNA(miRNA),发挥着决定性作用。除了在植物生长发育中的作用外,最近许多研究表明,在包括热胁迫(HS)在内的非生物胁迫期间,几种miRNA存在差异调控。因此,了解HS期间miRNA介导的基因表达的潜在机制,将使研究人员能够利用这种调控机制来应对HS反应。本综述重点关注植物(特别是作物)在HS期间参与生理、代谢和形态适应的miRNA及其调控网络。文中讨论了与作物植物具体相关的实例,包括miR156-SPL、miR169-NF-YA5、miR395-APS/AST、miR396-WRKY等。此外,我们还讨论了现有的植物miRNA数据库和生物信息学工具,这些工具有助于miRNA的鉴定及其在响应HS中的调控作用研究。最后,我们简要讨论了与HS相关的miRNA机制在提高作物植物耐热性方面的未来前景。