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TGMin:一个用于自由和表面支撑团簇的高效全局最小搜索程序。

TGMin: An efficient global minimum searching program for free and surface-supported clusters.

作者信息

Chen Xin, Zhao Ya-Fan, Zhang Yang-Yang, Li Jun

机构信息

Department of Chemistry and Laboratory of Organic Optoelectronics & Molecular Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China.

Institute of Applied Physics and Computational Mathematics and CAEP Software Center for High Performance Numerical Simulation, Beijing 100088, China.

出版信息

J Comput Chem. 2019 Apr 15;40(10):1105-1112. doi: 10.1002/jcc.25649. Epub 2018 Dec 14.

Abstract

In this article, we introduce an efficient global-minimum structural search program named Tsinghua Global Minimum 2 (TGMin-2), which is the successor of the original TGMin algorithm that was developed in our group in 2011. We have introduced a number of new features and improvements into TGMin-2, including a symmetric structure generation algorithm that can produce good initial seeds for small- and medium-size clusters, the duplicated structure identification algorithm, and the improved structure adaption algorithm that was implemented in the original TGMin code. To predict the simulated photoelectron spectrum (PE spectrum) automatically, we also implemented a standalone program named AutoPES (Auto Photoelectron Spectroscopy), which can be used to simulate PE spectra and compare them with experimental results automatically. We have demonstrated that TGMin-2 and AutoPES are powerful tools for studying free and surface-supported molecules, clusters, and nanoclusters. © 2018 Wiley Periodicals, Inc.

摘要

在本文中,我们介绍了一个名为清华全局最小值2(TGMin - 2)的高效全局最小结构搜索程序,它是我们团队于2011年开发的原始TGMin算法的后继版本。我们在TGMin - 2中引入了许多新特性和改进,包括一种对称结构生成算法,该算法可为中小型团簇生成良好的初始种子、重复结构识别算法以及在原始TGMin代码中实现的改进结构适配算法。为了自动预测模拟光电子能谱(PE谱),我们还实现了一个名为AutoPES(自动光电子能谱)的独立程序,它可用于模拟PE谱并自动将其与实验结果进行比较。我们已经证明,TGMin - 2和AutoPES是研究自由分子、表面支撑分子、团簇和纳米团簇的强大工具。© 2018威利期刊公司。

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