Department of Food and Animal Biotechnology, Seoul National University, Seoul, South Korea.
Department of Agricultural Biotechnology, Seoul National University, Seoul, South Korea.
Appl Environ Microbiol. 2019 Feb 20;85(5). doi: 10.1128/AEM.02462-18. Print 2019 Mar 1.
To control the spore-forming human pathogen , we isolated and characterized a novel endolysin, LysPBC2, from a newly isolated phage, PBC2. Compared to the narrow host range of phage PBC2, LysPBC2 showed very broad lytic activity against all , , and species tested. In addition to a catalytic domain and a cell wall binding domain, LysPBC2 has a spore binding domain (SBD) partially overlapping its catalytic domain, which specifically binds to spores but not to vegetative cells of Both immunogold electron microscopy and a binding assay indicated that the SBD binds the external region of the spore cortex layer. Several amino acid residues required for catalytic or spore binding activity of LysPBC2 were determined by mutagenesis studies. Interestingly, LysPBC2 derivatives with impaired spore binding activity showed an increased lytic activity against vegetative cells of compared with that of wild-type LysPBC2. Further biochemical studies revealed that these LysPBC2 derivatives have lower thermal stability, suggesting a stabilizing role of SBD in LysPBC2 structure. Bacteriophages produce highly evolved lytic enzymes, called endolysins, to lyse peptidoglycan and release their progeny from bacterial cells. Due to their potent lytic activity and specificity, the use of endolysins has gained increasing attention as a natural alternative to antibiotics. Since most endolysins from Gram-positive-bacterium-infecting phages have a modular structure, understanding the function of each domain is crucial to make effective endolysin-based therapeutics. Here, we report the functional and biochemical characterization of a phage endolysin, LysPBC2, which has an unusual spore binding domain and a cell wall binding domain. A single point mutation in the spore binding domain greatly enhanced the lytic activity of endolysin at the cost of reduced thermostability. This work contributes to the understanding of the role of each domain in LysPBC2 and will provide insight for the rational design of efficient antimicrobials or diagnostic tools for controlling .
为了控制人类孢子形成病原体,我们从一种新分离的噬菌体 PBC2 中分离并鉴定了一种新型内切酶 LysPBC2。与噬菌体 PBC2 狭窄的宿主范围相比,LysPBC2 对所有测试的 、 、和 种表现出非常广泛的裂解活性。除了催化结构域和细胞壁结合结构域外,LysPBC2 还有一个孢子结合结构域 (SBD),部分与其催化结构域重叠,该结构域特异性地结合 孢子但不结合 营养细胞。免疫金电子显微镜和结合实验均表明,SBD 结合了孢子皮质层的外部区域。通过突变研究确定了 LysPBC2 催化或孢子结合活性所需的几个氨基酸残基。有趣的是,与野生型 LysPBC2 相比,具有受损孢子结合活性的 LysPBC2 衍生物对 营养细胞的裂解活性增加。进一步的生化研究表明,这些 LysPBC2 衍生物的热稳定性较低,表明 SBD 在 LysPBC2 结构中起稳定作用。噬菌体产生高度进化的裂解酶,称为内溶素,以裂解肽聚糖并将其后代从细菌细胞中释放出来。由于其强大的裂解活性和特异性,内溶素作为抗生素的天然替代品越来越受到关注。由于大多数来自革兰氏阳性菌感染噬菌体的内溶素具有模块化结构,因此了解每个结构域的功能对于制造有效的基于内溶素的疗法至关重要。在这里,我们报告了一种 噬菌体内溶素 LysPBC2 的功能和生化特性,该内溶素有一个不寻常的孢子结合结构域和一个细胞壁结合结构域。孢子结合结构域中的单点突变大大提高了内溶素的裂解活性,但降低了热稳定性。这项工作有助于理解 LysPBC2 中每个结构域的作用,并为设计控制 的高效抗菌剂或诊断工具提供见解。