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多聚腺嘌呤介导的基于链置换的 DNA/RNA 检测的球形核酸。

Poly-adenine-mediated spherical nucleic acids for strand displacement-based DNA/RNA detection.

机构信息

Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201220, China; University of Chinese Academy of Sciences, Beijing 100049, China.

Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201220, China.

出版信息

Biosens Bioelectron. 2019 Feb 15;127:85-91. doi: 10.1016/j.bios.2018.12.003. Epub 2018 Dec 7.

Abstract

DNA-gold nanoparticles (AuNPs) conjugate is one of the most versatile bionanomaterials for biomedical and clinical diagnosis. However, to finely tune the hybridization ability and precisely control the orientation and conformation of surface-tethered oligonucleotides on AuNPs remains a hurdle. In this work, we developed a poly adenine-mediated spherical nucleic acid (polyA-mediated SNA) strategy by assembling di-block DNA probes on gold nanoparticles (AuNPs) to spatially control interdistance and hybridization ability of oligonucleotides on AuNPs. By modulating length of poly A bound on the SNA with different degrees of constructing, we presented significant improved biosensing performance including high hybridization efficiency, and expanded dynamic range of analytes with more sensitive detection limit. Furthermore, this polyA design could facilitate the programmable detection for DNA in serum environment and simultaneous multicolor detection of three different microRNAs associated with pancreatic carcinoma. The demonstration of the link between modulation of SNA assembly strategy and biodetection capability will increase the development of high performance diagnostic tools for translational biomedicine.

摘要

DNA-金纳米粒子(AuNPs)缀合物是生物医学和临床诊断中最通用的生物纳米材料之一。然而,精细调整杂交能力并精确控制表面连接的寡核苷酸在 AuNPs 上的取向和构象仍然是一个障碍。在这项工作中,我们通过在金纳米粒子(AuNPs)上组装二嵌段 DNA 探针开发了一种多腺嘌呤介导的球形核酸(polyA 介导的 SNA)策略,从而空间控制寡核苷酸在 AuNPs 上的间隔和杂交能力。通过调节与不同程度构建结合的 poly A 的长度,我们提出了显著提高的生物传感性能,包括高杂交效率,并扩大了分析物的动态范围,具有更灵敏的检测限。此外,这种 polyA 设计可以促进在血清环境中对 DNA 的可编程检测以及同时对三种与胰腺癌相关的不同 microRNA 的多色检测。SNA 组装策略的调制与生物检测能力之间的联系的证明将增加用于转化医学的高性能诊断工具的开发。

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