• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

光谱学单分子定位显微镜中光谱精度的理论分析

Theoretical analysis of spectral precision in spectroscopic single-molecule localization microscopy.

作者信息

Song Ki-Hee, Dong Biqin, Sun Cheng, Zhang Hao F

机构信息

Department of Biomedical Engineering, Northwestern University, Evanston, Illinois 60208, USA.

Department of Mechanical Engineering, Northwestern University, Evanston, Illinois 60208, USA.

出版信息

Rev Sci Instrum. 2018 Dec;89(12):123703. doi: 10.1063/1.5054144.

DOI:10.1063/1.5054144
PMID:30599574
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6289825/
Abstract

Spectroscopic single-molecule localization microscopy (sSMLM) is a novel super-resolution imaging technology, which simultaneously records the nanoscopic location and the corresponding full emission spectrum of every stochastic single-molecule emission event. This spectroscopic imaging capability of sSMLM necessitates the establishment of a theoretical foundation of the newly introduced spectral precision and to guide the system design and optimization. Based on numerical simulation and analytical solution, we introduced such a theoretical model to analyze spectral precision by considering the main system parameters, including signal and background shot noises, readout noise, and the spectral calibration procedure. Using this model, we demonstrated the delicate balance among these parameters in achieving the optimal spectral precision and discovered that the best spectral precision can only be achieved at a particular system spectral dispersion. For example, with a given signal of 3000 photons and a readout noise of 2 e-, a system spectral dispersion of 1.6 nm/pixel is required for sSMLM to achieve the highest spectral precision of 1.31 nm.

摘要

光谱单分子定位显微镜(sSMLM)是一种新型的超分辨率成像技术,它能同时记录每个随机单分子发射事件的纳米级位置和相应的完整发射光谱。sSMLM的这种光谱成像能力需要建立新引入的光谱精度的理论基础,以指导系统设计和优化。基于数值模拟和解析解,我们引入了这样一个理论模型,通过考虑信号和背景散粒噪声、读出噪声以及光谱校准程序等主要系统参数来分析光谱精度。使用这个模型,我们展示了这些参数在实现最佳光谱精度方面的微妙平衡,并发现只有在特定的系统光谱色散下才能实现最佳光谱精度。例如,在给定3000个光子的信号和2 e-的读出噪声的情况下,sSMLM要实现1.31 nm的最高光谱精度需要1.6 nm/像素的系统光谱色散。

相似文献

1
Theoretical analysis of spectral precision in spectroscopic single-molecule localization microscopy.光谱学单分子定位显微镜中光谱精度的理论分析
Rev Sci Instrum. 2018 Dec;89(12):123703. doi: 10.1063/1.5054144.
2
Physically informed Monte Carlo simulation of dual-wedge prism-based spectroscopic single-molecule localization microscopy.基于双楔形棱镜的光谱单分子定位显微镜的物理信息蒙特卡罗模拟。
J Biomed Opt. 2024 Jan;29(Suppl 1):S11502. doi: 10.1117/1.JBO.29.S1.S11502. Epub 2023 Oct 3.
3
Multicolor super-resolution imaging using spectroscopic single-molecule localization microscopy with optimal spectral dispersion.使用具有最佳光谱色散的光谱单分子定位显微镜进行多色超分辨率成像。
Appl Opt. 2019 Mar 20;58(9):2248-2255. doi: 10.1364/AO.58.002248.
4
Monolithic dual-wedge prism-based spectroscopic single-molecule localization microscopy.基于整体双楔形棱镜的光谱单分子定位显微镜技术
Nanophotonics. 2022 Mar;11(8):1527-1535. doi: 10.1515/nanoph-2021-0541. Epub 2022 Jan 21.
5
Three-dimensional biplane spectroscopic single-molecule localization microscopy.三维双平面光谱单分子定位显微镜技术
Optica. 2019 Jun 20;6(6):709-715. doi: 10.1364/optica.6.000709. Epub 2019 May 23.
6
Symmetrically dispersed spectroscopic single-molecule localization microscopy.对称分散光谱单分子定位显微镜术
Light Sci Appl. 2020 May 25;9:92. doi: 10.1038/s41377-020-0333-9. eCollection 2020.
7
Deep-learning-assisted spectroscopic single-molecule localization microscopy based on spectrum-to-spectrum denoising.基于谱到谱去噪的深度学习辅助光谱单分子定位显微镜技术
Nanoscale. 2024 Mar 14;16(11):5729-5736. doi: 10.1039/d3nr05870k.
8
Spectroscopic single-molecule localization microscopy: applications and prospective.光谱单分子定位显微镜:应用与展望。
Nano Converg. 2023 Mar 21;10(1):14. doi: 10.1186/s40580-023-00363-9.
9
Improving spatial precision and field-of-view in wavelength-tagged single-particle tracking using spectroscopic single-molecule localization microscopy.利用光谱单分子定位显微镜提高波长标记单粒子追踪中的空间精度和视野。
Appl Opt. 2021 May 1;60(13):3647-3658. doi: 10.1364/AO.415275.
10
Machine-learning based spectral classification for spectroscopic single-molecule localization microscopy.基于机器学习的光谱分类在光谱单分子定位显微镜中的应用。
Opt Lett. 2019 Dec 1;44(23):5864-5867. doi: 10.1364/OL.44.005864.

引用本文的文献

1
DeepQR: single-molecule QR codes for optical gene-expression analysis.深度二维码:用于光学基因表达分析的单分子二维码
Nanophotonics. 2024 Jul 30;14(15):2549-2561. doi: 10.1515/nanoph-2024-0236. eCollection 2025 Aug.
2
Deep learning-based spectroscopic single-molecule localization microscopy.基于深度学习的光谱单分子定位显微镜。
J Biomed Opt. 2024 Jun;29(6):066501. doi: 10.1117/1.JBO.29.6.066501. Epub 2024 May 24.
3
Spectral precision improvement with demagnifying spectral images in spectroscopic nanoscopy.光谱纳米显微镜中通过缩小光谱图像提高光谱精度
J Opt Soc Am A Opt Image Sci Vis. 2024 Jan 1;41(1):39-44. doi: 10.1364/JOSAA.497634.
4
Physically informed Monte Carlo simulation of dual-wedge prism-based spectroscopic single-molecule localization microscopy.基于双楔形棱镜的光谱单分子定位显微镜的物理信息蒙特卡罗模拟。
J Biomed Opt. 2024 Jan;29(Suppl 1):S11502. doi: 10.1117/1.JBO.29.S1.S11502. Epub 2023 Oct 3.
5
Switchable and Functional Fluorophores for Multidimensional Single-Molecule Localization Microscopy.用于多维单分子定位显微镜的可切换功能荧光团
Chem Biomed Imaging. 2023 Jun 28;1(5):403-413. doi: 10.1021/cbmi.3c00045. eCollection 2023 Aug 28.
6
Three-dimensional biplane spectroscopic single-molecule localization microscopy.三维双平面光谱单分子定位显微镜技术
Optica. 2019 Jun 20;6(6):709-715. doi: 10.1364/optica.6.000709. Epub 2019 May 23.
7
Multimodal single-molecule microscopy with continuously controlled spectral resolution.具有连续可控光谱分辨率的多模态单分子显微镜。
Biophys Rep (N Y). 2021 Aug 6;1(1):100013. doi: 10.1016/j.bpr.2021.100013. eCollection 2021 Sep 8.
8
Enabling Spectrally Resolved Single-Molecule Localization Microscopy at High Emitter Densities.在高辐射密度下实现光谱分辨单分子定位显微镜技术。
Nano Lett. 2022 Nov 9;22(21):8618-8625. doi: 10.1021/acs.nanolett.2c03140. Epub 2022 Oct 21.
9
Monolithic dual-wedge prism-based spectroscopic single-molecule localization microscopy.基于整体双楔形棱镜的光谱单分子定位显微镜技术
Nanophotonics. 2022 Mar;11(8):1527-1535. doi: 10.1515/nanoph-2021-0541. Epub 2022 Jan 21.
10
Improving spatial precision and field-of-view in wavelength-tagged single-particle tracking using spectroscopic single-molecule localization microscopy.利用光谱单分子定位显微镜提高波长标记单粒子追踪中的空间精度和视野。
Appl Opt. 2021 May 1;60(13):3647-3658. doi: 10.1364/AO.415275.

本文引用的文献

1
Simultaneous measurement of emission color and 3D position of single molecules.单分子发射颜色和三维位置的同步测量。
Opt Express. 2016 Mar 7;24(5):4996-5013. doi: 10.1364/OE.24.004996.
2
Spectrally Resolved, Functional Super-Resolution Microscopy Reveals Nanoscale Compositional Heterogeneity in Live-Cell Membranes.光谱分辨功能超分辨率显微镜揭示活细胞膜中的纳米级组成异质性。
J Am Chem Soc. 2017 Aug 16;139(32):10944-10947. doi: 10.1021/jacs.7b03846. Epub 2017 Aug 7.
3
Super-Resolution Imaging and Plasmonics.超分辨率成像与等离子体学。
Chem Rev. 2017 Jun 14;117(11):7538-7582. doi: 10.1021/acs.chemrev.6b00547. Epub 2017 Jan 13.
4
Multi-dimensional super-resolution imaging enables surface hydrophobicity mapping.多维超分辨率成像可实现表面疏水性成像。
Nat Commun. 2016 Dec 8;7:13544. doi: 10.1038/ncomms13544.
5
Super-resolution spectroscopic microscopy via photon localization.基于光子定位的超分辨率光谱显微镜。
Nat Commun. 2016 Jul 25;7:12290. doi: 10.1038/ncomms12290.
6
Super-Resolution Imaging of Molecular Emission Spectra and Single Molecule Spectral Fluctuations.分子发射光谱和单分子光谱涨落的超分辨率成像
PLoS One. 2016 Mar 22;11(3):e0147506. doi: 10.1371/journal.pone.0147506. eCollection 2016.
7
Ultrahigh-throughput single-molecule spectroscopy and spectrally resolved super-resolution microscopy.超高通量单分子光谱学和光谱分辨超分辨率显微镜。
Nat Methods. 2015 Oct;12(10):935-8. doi: 10.1038/nmeth.3528. Epub 2015 Aug 17.
8
Single-molecule super-resolution microscopy reveals how light couples to a plasmonic nanoantenna on the nanometer scale.单分子超分辨率显微镜揭示了光如何在纳米尺度上与等离子体纳米天线耦合。
Nano Lett. 2015 Apr 8;15(4):2662-70. doi: 10.1021/acs.nanolett.5b00319. Epub 2015 Mar 26.
9
Effects of fixed pattern noise on single molecule localization microscopy.固定模式噪声对单分子定位显微镜的影响。
Phys Chem Chem Phys. 2014 Oct 21;16(39):21586-94. doi: 10.1039/c4cp02280g. Epub 2014 Sep 5.
10
Simultaneous measurement of position and color of single fluorescent emitters using diffractive optics.使用衍射光学器件同时测量单个荧光发射体的位置和颜色。
Opt Lett. 2014 Jun 1;39(11):3352-5. doi: 10.1364/OL.39.003352.