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基于 H 核磁共振的脑脊液代谢组学分析,以鉴定结核性脑膜炎的代谢特征和标志物。

H nuclear magnetic resonance-based metabolic profiling of cerebrospinal fluid to identify metabolic features and markers for tuberculosis meningitis.

机构信息

Department of Neurology, First Hospital, Jilin University, Changchun 130021, China.

Blood Bank, Jilin Women and Children Health Hospital, Changchun 130021, China.

出版信息

Infect Genet Evol. 2019 Mar;68:253-264. doi: 10.1016/j.meegid.2019.01.003. Epub 2019 Jan 4.

Abstract

BACKGROUND

Tuberculosis meningitis (TBM) is the most severe form of tuberculosis, and currently lacks efficient diagnostic approaches. Metabolomics has the potential to differentiate patients with TBM from those with other forms of meningitis and meningitis-negative individuals. However, no systemic metabolomics research has compared the cerebrospinal fluid (CSF) of these patients.

METHODS

H nuclear magnetic resonance (NMR) was used for CSF metabolic profiling. Principal component analysis and orthogonal signal correction-partial least squares-discriminant analysis (OPLS-DA) were used to screen for important variables. The Human Metabolome Database was used to identify metabolites, and MetaboAnalyst 4.0 was used for pathway analysis and over-representation analysis.

RESULTS

OPLS-DA modeling could distinguish TBM from other forms of meningitis, and several significantly changed metabolites were identified. Additionally, 23, 6, and 21 metabolites were able to differentiate TBM from viral meningitis, bacterial meningitis, and meningitis-negative groups, respectively. Pathway analysis indicated that these metabolites were mainly involved in carbohydrate and amino acid metabolism, and over-representation analysis indicated that some of these pathways were over-represented.

CONCLUSIONS

The metabolites identified have the potential to serve as biomarkers for TBM diagnosis, and carbohydrate and amino acid metabolism are perturbed in the CSF of patents with TBM. Metabolomics is a valuable approach for screening TBM biomarkers. With further investigation, the metabolites identified in this study could aid in TBM diagnosis.

摘要

背景

结核性脑膜炎(TBM)是最严重的结核病形式,目前缺乏有效的诊断方法。代谢组学有可能将 TBM 患者与其他形式的脑膜炎和脑膜炎阴性个体区分开来。然而,目前尚无系统的代谢组学研究比较这些患者的脑脊液(CSF)。

方法

采用氢核磁共振(NMR)进行 CSF 代谢谱分析。采用主成分分析和正交信号校正偏最小二乘判别分析(OPLS-DA)筛选重要变量。采用人类代谢组数据库鉴定代谢物,采用代谢分析 4.0 进行途径分析和过度表达分析。

结果

OPLS-DA 模型能够区分 TBM 与其他形式的脑膜炎,并且鉴定出了一些明显改变的代谢物。此外,能够分别将 TBM 与病毒性脑膜炎、细菌性脑膜炎和脑膜炎阴性组区分开来的代谢物分别有 23、6 和 21 个。途径分析表明,这些代谢物主要涉及碳水化合物和氨基酸代谢,过度表达分析表明,其中一些途径存在过度表达。

结论

鉴定出的代谢物有可能作为 TBM 诊断的生物标志物,TBM 患者的 CSF 中碳水化合物和氨基酸代谢受到干扰。代谢组学是筛选 TBM 生物标志物的一种有价值的方法。通过进一步研究,本研究中鉴定出的代谢物可能有助于 TBM 诊断。

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