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Nature. 2017 Aug 22;548(7668):387-388. doi: 10.1038/548387a.
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Predictable convergence in hemoglobin function has unpredictable molecular underpinnings.血红蛋白功能中可预测的趋同现象有着不可预测的分子基础。
Science. 2016 Oct 21;354(6310):336-339. doi: 10.1126/science.aaf9070.
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Are Convergent and Parallel Amino Acid Substitutions in Protein Evolution More Prevalent Than Neutral Expectations?蛋白质进化中的趋同和平行氨基酸替换是否比中性预期更普遍?
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Pathological unfoldomics of uncontrolled chaos: intrinsically disordered proteins and human diseases.失控混乱的病理展开组学:内在无序蛋白质与人类疾病
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Sorting out the FACS: a devil in the details.梳理荧光激活细胞分选术:细节决定成败。
Cell Rep. 2014 Mar 13;6(5):779-81. doi: 10.1016/j.celrep.2014.02.021.
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Reproducibility: The risks of the replication drive.可重复性:重复研究的风险。
Nature. 2013 Nov 21;503(7476):333-4. doi: 10.1038/503333a.
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Parallel molecular evolution in an herbivore community.食草动物群落中的平行分子进化。
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Mayr, mathematics and the study of evolution.迈尔,数学与进化研究。
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10
Intrinsically unstructured proteins and their functions.内在无序蛋白质及其功能。
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生物材料的性质和生物医学研究中的不可重复性问题。

The nature of the biological material and the irreproducibility problem in biomedical research.

机构信息

Biomedical Division, The Institute of Molecular Biology and Biotechnology, FORTH-ITE, Heraklion, Crete, Greece.

Laboratory of Biological Chemistry, Medical School, University of Ioannina, Ioannina, Greece.

出版信息

EMBO J. 2019 Feb 15;38(4). doi: 10.15252/embj.2018101011. Epub 2019 Jan 7.

DOI:10.15252/embj.2018101011
PMID:30617085
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6376269/
Abstract

Biomedical research has a reproducibility problem since various crucial landmark papers could not be independently reproduced. While there are many causes related to statistical analysis, methodology or insufficient reporting of experimental details, this commentary argues that the complexity of biological material itself is, until now, a largely ignored source of irreproducibility. By discussing examples from evolutionary biology, intrinsically disordered proteins and current biomedical research, it contends that some results are irreproducible because we do not have the knowledge, the tools or the analytical ability to understand biological complexity and how it can give rise to different results. Instead of casting irreproducible research out as bad or sloppy science, they should serve as an inspiration for pioneering research not just to develop such tools but also to attempt to explore what lies beneath our current inability to deal with complexity.

摘要

由于各种重要的里程碑式论文无法独立重现,生物医学研究存在可重复性问题。虽然存在许多与统计分析、方法或实验细节报告不足相关的原因,但本文认为,生物材料本身的复杂性迄今为止是一个很大程度上被忽视的不可重复性来源。通过讨论来自进化生物学、无序蛋白质和当前生物医学研究的例子,本文认为,一些结果不可重现是因为我们没有知识、工具或分析能力来理解生物复杂性以及它如何产生不同的结果。这些不可重现的研究不应被视为糟糕或草率的科学,而应成为开拓性研究的灵感来源,不仅要开发这些工具,还要尝试探索我们目前无法应对复杂性的背后原因。