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靶向发现和生物合成法尼基转移酶抑制剂肽酰基精氨酸脱亚氨酶 E。

Targeted Rediscovery and Biosynthesis of the Farnesyl-Transferase Inhibitor Pepticinnamin E.

机构信息

Department of Chemistry, University of North Carolina at Chapel Hill, CB#3290, Chapel Hill, NC, 27514, USA.

出版信息

Chembiochem. 2019 Jun 3;20(11):1387-1393. doi: 10.1002/cbic.201900025. Epub 2019 May 2.

DOI:10.1002/cbic.201900025
PMID:30694017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6750724/
Abstract

The natural product pepticinnamin E potently inhibits protein farnesyl transferases and has potential applications in treating cancer and malaria. Pepticinnamin E contains a rare N-terminal cinnamoyl moiety as well as several nonproteinogenic amino acids, including the unusual 2-chloro-3-hydroxy-4-methoxy-N-methyl-L-phenylalanine. The biosynthesis of pepticinnamin E has remained uncharacterized because its original producing strain is no longer available. Here we identified a gene cluster (pcm) for this natural product in a new producer, Actinobacteria bacterium OK006, by means of a targeted rediscovery strategy. We demonstrated that the pcm cluster is responsible for the biosynthesis of pepticinnamin E, a nonribosomal peptide/polyketide hybrid. We also characterized a key O-methyltransferase that modifies 3,4-dihydroxy-l-phenylalanine. Our work has identified the gene cluster for pepticinnamins for the first time and sets the stage for elucidating the unique chemistry required for biosynthesis.

摘要

天然产物肽酰肉桂胺 E 能强力抑制蛋白质法呢基转移酶,有望用于治疗癌症和疟疾。肽酰肉桂胺 E 含有一个罕见的 N 端肉桂酰部分以及几种非天然氨基酸,包括不寻常的 2-氯-3-羟基-4-甲氧基-N-甲基-L-苯丙氨酸。由于其原始生产菌株已不复存在,因此肽酰肉桂胺 E 的生物合成仍未得到阐明。在这里,我们通过靶向再发现策略,在一种新的生产菌放线菌 OK006 中鉴定了该天然产物的基因簇(pcm)。我们证明 pcm 簇负责肽酰肉桂胺 E 的生物合成,肽酰肉桂胺 E 是一种非核糖体肽/聚酮杂合化合物。我们还鉴定了一个关键的 O-甲基转移酶,该酶修饰 3,4-二羟基-L-苯丙氨酸。我们的工作首次鉴定了肽酰肉桂胺的基因簇,为阐明生物合成所需的独特化学性质奠定了基础。

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本文引用的文献

1
Synthesis and In Vitro Evaluation of the Ras Farnesyltransferase Inhibitor Pepticinnamin E.Ras法尼基转移酶抑制剂Pepticinnamin E的合成与体外评价
Angew Chem Int Ed Engl. 1998 May 18;37(9):1236-1239. doi: 10.1002/(SICI)1521-3773(19980518)37:9<1236::AID-ANIE1236>3.0.CO;2-F.
2
In Vitro Biosynthesis of the Nonproteinogenic Amino Acid Methoxyvinylglycine.体外生物合成非蛋白氨基酸甲氧基乙烯基甘氨酸。
Angew Chem Int Ed Engl. 2018 Jun 4;57(23):6780-6785. doi: 10.1002/anie.201713419. Epub 2018 May 8.
3
Halogenation of glycopeptide antibiotics occurs at the amino acid level during non-ribosomal peptide synthesis.糖肽类抗生素的卤化作用发生在非核糖体肽合成过程中的氨基酸水平。
Chem Sci. 2017 Sep 1;8(9):5992-6004. doi: 10.1039/c7sc00460e. Epub 2017 Jul 13.
4
Functional and structural characterisation of a bacterial O-methyltransferase and factors determining regioselectivity.一种细菌O-甲基转移酶的功能与结构表征及区域选择性的决定因素
FEBS Lett. 2017 Jan;591(2):312-321. doi: 10.1002/1873-3468.12530. Epub 2017 Jan 8.
5
Specific Enzymatic Halogenation-From the Discovery of Halogenated Enzymes to Their Applications In Vitro and In Vivo.特定酶卤化反应——从卤化酶的发现到其在体外和体内的应用。
Angew Chem Int Ed Engl. 2016 May 23;55(22):6374-89. doi: 10.1002/anie.201509573. Epub 2016 Apr 5.
6
Draft Genome Sequences of Four Streptomyces Isolates from the Populus trichocarpa Root Endosphere and Rhizosphere.来自毛果杨根内圈和根际的四株链霉菌分离株的基因组序列草图
Genome Announc. 2015 Nov 12;3(6):e01344-15. doi: 10.1128/genomeA.01344-15.
7
An automated Genomes-to-Natural Products platform (GNP) for the discovery of modular natural products.用于发现模块化天然产物的自动化基因组到天然产物平台(GNP)。
Nat Commun. 2015 Sep 28;6:8421. doi: 10.1038/ncomms9421.
8
Minimum Information about a Biosynthetic Gene cluster.生物合成基因簇的最低信息要求
Nat Chem Biol. 2015 Sep;11(9):625-31. doi: 10.1038/nchembio.1890.
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Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43. doi: 10.1093/nar/gkv437. Epub 2015 May 6.
10
X-domain of peptide synthetases recruits oxygenases crucial for glycopeptide biosynthesis.肽合成酶的 X 结构域招募糖肽生物合成所必需的加氧酶。
Nature. 2015 May 7;521(7550):105-9. doi: 10.1038/nature14141. Epub 2015 Feb 9.