Sharma Akanksha, Islam M Hayatul, Fatima Nida, Upadhyay Tarun K, Khan M Kalim A, Dwivedi Upendra N, Sharma Rolee
Department of Biosciences, Integral University, Lucknow, UP, 226026, India.
Department of Bioengineering, Integral University, Lucknow, 226026, India.
Mol Biol Rep. 2019 Apr;46(2):1715-1725. doi: 10.1007/s11033-019-04621-0. Epub 2019 Feb 4.
Tuberculosis (TB) is a leading cause of mortality amongst infectious diseases. While the anti-TB drugs can cure TB, the non-compliance and rapidly increasing resistance is of serious concern. The study aimed to search novel potent inhibitor(s) against MabA and PKS18 targets of Mycobacterium tuberculosis (M.tb.) by virtual screening of anthraquinones from marine fungi. The target proteins MabA and PKS18 involved in M.tb. mycolic acid biosynthesis were retrieved from RCSB Protein Data Bank. Chemical structures of 100 marine fungal anthraquinones were retrieved from the PubChem database. These were filtered through Lipinski's rule of five (for druglikeness) and in silico ADME/Tox analysis (for pharmacokinetic properties) and subjected to molecular docking analysis using AutoDock 4.2. The molecular interaction revealed averufin to possess dual inhibitory potential against M.tb. MabA and PKS18 with binding energy of - 8.84 kcal/mol and - 8.23 kcal/mol, and Ki values of 1.79 and 3.12 µM respectively. Averufin exhibits improved drug-like properties, ADMET profile and binding affinity to both targets as compared to control drugs. Our study suggests that averufin a natural anthraquinone, satisfies all the in silico parameters tested and is expected to efficiently inhibit M.tb. mycolic acid pathway. It might therefore emerge as a promising dual-targeted, novel natural anti-TB lead in future.
结核病(TB)是传染病中导致死亡的主要原因。虽然抗结核药物可以治愈结核病,但不依从性和耐药性的迅速增加令人严重担忧。该研究旨在通过虚拟筛选海洋真菌中的蒽醌类化合物,寻找针对结核分枝杆菌(M.tb.)的MabA和PKS18靶点的新型强效抑制剂。从RCSB蛋白质数据库中检索了参与M.tb.分枝菌酸生物合成的靶点蛋白MabA和PKS18。从PubChem数据库中检索了100种海洋真菌蒽醌的化学结构。这些化合物通过Lipinski的五规则(用于类药性)和计算机辅助ADME/Tox分析(用于药代动力学性质)进行筛选,并使用AutoDock 4.2进行分子对接分析。分子相互作用显示,阿弗菌素对M.tb.的MabA和PKS18具有双重抑制潜力,结合能分别为-8.84 kcal/mol和-8.23 kcal/mol,Ki值分别为1.79和3.12 μM。与对照药物相比,阿弗菌素表现出更好的类药性质、ADMET特性和对两个靶点的结合亲和力。我们的研究表明,天然蒽醌阿弗菌素满足所有测试的计算机参数,有望有效抑制M.tb.的分枝菌酸途径。因此,它可能在未来成为一种有前景的双靶点新型天然抗结核先导药物。