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慢性中心性浆液性脉络膜视网膜病变家族的外显子组测序

Exome sequencing in families with chronic central serous chorioretinopathy.

作者信息

Schellevis Rosa L, van Dijk Elon H C, Breukink Myrte B, Keunen Jan E E, Santen Gijs W E, Hoyng Carel B, de Jong Eiko K, Boon Camiel J F, den Hollander Anneke I

机构信息

Department of Ophthalmology, Donders Institute of Brain, Cognition, and Behaviour, Radboud University Medical Center, Nijmegen, The Netherlands.

Department of Ophthalmology, Leiden University Medical Center, Leiden, The Netherlands.

出版信息

Mol Genet Genomic Med. 2019 Apr;7(4):e00576. doi: 10.1002/mgg3.576. Epub 2019 Feb 6.

Abstract

BACKGROUND

Central serous chorioretinopathy (CSC) is a chorioretinal disease characterized by fluid accumulation between the neuroretina and retinal pigment epithelium with unknown etiology. Family studies have suggested a heritable component for CSC with an autosomal dominant inheritance pattern. Therefore, exome sequencing was performed on familial cCSC to indentify the genetic components contributing to familial cCSC.

METHODS

Exome sequencing was performed on 72 individuals of 18 families with CSC. In these families, we determined whether rare genetic variants (minor allele frequency < 1%) were segregated with CSC and also performed familial gene-burden analysis.

RESULTS

In total, 11 variants segregated in two out of 18 families. One of these variants, c.4145C>T; p.T1382I (rs61758735) in the PTPRB gene, was also associated with CSC in a large case-control cohort sequenced previously (p = 0.009). Additionally, in 28 genes two or more different heterozygous variants segregated in two or more families, but no gene showed consistent associations in both the family gene-burden results and gene-burden analysis in the case-control cohort.

CONCLUSION

We identified potential candidate genes for familial CSC and managed to exclude Mendelian inheritance of variants in one or a limited number of genes. Instead, familial CSC may be a heterogeneous Mendelian disease caused by variants in many different genes, or alternatively CSC may represent a complex disease to which both environmental factors and genetics contribute.

摘要

背景

中心性浆液性脉络膜视网膜病变(CSC)是一种脉络膜视网膜疾病,其特征是神经视网膜与视网膜色素上皮之间积液,病因不明。家族研究表明CSC具有遗传成分,呈常染色体显性遗传模式。因此,对家族性cCSC进行外显子组测序,以确定导致家族性cCSC的遗传成分。

方法

对18个患有CSC的家族中的72名个体进行外显子组测序。在这些家族中,我们确定罕见遗传变异(次要等位基因频率<1%)是否与CSC共分离,并进行家族基因负荷分析。

结果

总共11个变异在18个家族中的2个家族中共分离。其中一个变异,PTPRB基因中的c.4145C>T;p.T1382I(rs61758735),在先前测序的一个大型病例对照队列中也与CSC相关(p = 0.009)。此外,在28个基因中,两个或更多不同的杂合变异在两个或更多家族中共分离,但在家族基因负荷结果和病例对照队列的基因负荷分析中,没有一个基因显示出一致的关联。

结论

我们确定了家族性CSC的潜在候选基因,并设法排除了一个或有限数量基因中变异的孟德尔遗传。相反,家族性CSC可能是由许多不同基因中的变异引起的异质性孟德尔疾病,或者CSC可能是一种环境因素和遗传学都起作用的复杂疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bef4/6465660/4442998b2d53/MGG3-7-na-g001.jpg

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