Shih S L, Tsai W S, Lee L M, Wang J T, Green S K, Kenyon L
AVRDC-The World Vegetable Center, Shanhua, Tainan, 74151 Taiwan, Republic of China.
Plant Dis. 2010 May;94(5):637. doi: 10.1094/PDIS-94-5-0637B.
Whitefly-transmitted begomoviruses (family Geminiviridae, genus Begomovirus) cause severe epidemic and high yield losses on pepper (Capsicum annuum) crops in many areas of the world. In Taiwan, pepper plants showing leaf curling, blistering, distortion, mild vein yellowing, and stunting were observed in fields in Tainan County in 2007, but with disease incidence less than 10%. However, disease incidence of more than 70% was observed in some fields in Pingtung, Kaohsiung, Chiayi, and Yunlin counties in 2009. Two symptomatic samples in 2007 and three for each county in 2009 were collected for begomovirus detection. Viral DNA was extracted and tested for the presence of begomoviral DNA-A, DNA-B, and associated satellite DNA by PCR using primer pairs PAL1v1978/PAR1c715 (4), DNABLC1/DNABLV2 (2), and Beta01/Beta02 (1), respectively. The expected 1.5-kb PCR product for DNA-A and 2.6-kb for DNA-B were obtained from all samples. However, DNA-beta was not detectable in any of the samples. One positive sample from each, Pingtung (LG6-2), Kaoshiung (LJ3-5), Tainan (P2-4), Chiayi (SG4-3), and Yunlin (HW2-2), were selected for further molecular characterization of DNA-A and DNA-B. On the basis of the sequences of the 1.5-kb DNA-A and 2.6-kb DNA-B PCR product, specific PCR primers were designed to obtain the complete DNA-A and DNA-B sequences for pepper-infecting begomovirus isolate LG6-2 (GenBank Accession Nos. GU208515 and GU208519), LJ3-5 (GenBank Nos. GU208516 and GU208520), P2-4 (GenBank Nos. EU249457 and EU249458), SG4-3 (GenBank Nos. GU208517 and GU208521), and HW2-2 (GenBank Nos. GU208518 and GU208522). The five isolates each contained the begomoviral conserved nonanucleotide sequence-TAATATTAC in DNA-As and DNA-Bs, six open reading frames (ORFs AV1, AV2, AC1, AC2, AC3, and AC4) in DNA-As, and two open reading frames (ORFs BV1 and BC1) in DNA-Bs. Sequence comparison by MegAlign software (DNASTAR, Inc. Madison, WI) showed that the five pepper-infecting begomovirus isolates had 99% nucleotide sequence identity in DNA-As and DNA-Bs and so they are considered isolates of the same species. BLASTn analysis with begomovirus sequences available in the GenBank database at the National Center for Biotechnology Information (Bethesda, MD) indicated that the DNA-As and DNA-Bs of the five isolates had the highest nucleotide sequence identity of 99% each with the respective DNA-A and DNA-B of Tomato yellow leaf curl Thailand virus (TYLCTHV; GenBank Nos. EF577266 and EF577267), a recently emerging bipartite begomovirus infecting tomato in Taiwan (3). On the basis of the DNA-A sequence comparison and the International Committee on Taxonomy of Viruses demarcation of species at 89% sequence identity, these virus isolates belong to the species TYLCTHV. The isolate P2-4 was found transmissible to C. annuum 'Early Calwonder' by whitefly (Bemisia tabaci biotype B) and induced the same leaf curling, blistering, and mild vein yellowing symptoms as those observed in pepper fields. To our knowledge, this is the first report of a begomovirus infecting pepper in Taiwan. The presence of TYLCTHV in the major pepper-production areas should be taken into consideration for pepper disease management and in developing begomovirus resistant pepper cultivars for Taiwan. References: (1) R. W. Briddon et al. Mol. Biotechnol. 20:315, 2002. (2) S. K. Green et al. Plant Dis. 85:1286, 2001. (3) F.-J. Jan et al. Plant Dis. 91:1363, 2007 (4) M. R. Rojas et al. Plant Dis. 77:340, 1993.
粉虱传播的双生病毒(双生病毒科,菜豆金色花叶病毒属)在世界许多地区的辣椒(辣椒属)作物上引发严重流行并造成高产损失。2007年,在台湾台南县的田间观察到辣椒植株出现叶片卷曲、起泡、变形、轻度叶脉黄化和生长受阻等症状,但发病率低于10%。然而,2009年在屏东、高雄、嘉义、云林等县的一些田间观察到发病率超过70%。采集了2007年的2个有症状样本以及2009年各县的3个样本用于双生病毒检测。提取病毒DNA,并分别使用引物对PAL1v1978/PAR1c715(4)、DNABLC1/DNABLV2(2)和Beta01/Beta02(1)通过PCR检测双生病毒DNA-A、DNA-B及相关卫星DNA的存在。所有样本均获得了预期的1.5 kb DNA-A PCR产物和2.6 kb DNA-B PCR产物。然而,在任何样本中均未检测到DNA-β。从屏东(LG6-2)、高雄(LJ3-5)、台南(P2-4)、嘉义(SG4-3)和云林(HW2-2)各选取一个阳性样本,对DNA-A和DNA-B进行进一步的分子特征分析。根据1.5 kb DNA-A和2.6 kb DNA-B PCR产物的序列,设计了特异性PCR引物,以获得感染辣椒的双生病毒分离物LG6-2(GenBank登录号GU208515和GU208519)、LJ3-5(GenBank登录号GU208516和GU208520)、P2-4(GenBank登录号EU249457和EU2494T58)、SG4-3(GenBank登录号GU208517和GU208521)和HW2-2(GenBank登录号GU208518和GU208522)的完整DNA-A和DNA-B序列。这五个分离物在DNA-A和DNA-B中均含有双生病毒保守的九核苷酸序列-TAATATTAC,在DNA-A中有六个开放阅读框(ORF AV1、AV2、AC1、AC2、AC3和AC4),在DNA-B中有两个开放阅读框(ORF BV1和BC1)。通过MegAlign软件(DNASTAR公司,威斯康星州麦迪逊)进行的序列比较表明,这五个感染辣椒的双生病毒分离物在DNA-A和DNA-B中的核苷酸序列同一性为99%,因此它们被认为是同一物种的分离物。使用美国国立生物技术信息中心(马里兰州贝塞斯达)GenBank数据库中可用的双生病毒序列进行BLASTn分析表明,这五个分离物的DNA-A和DNA-B与泰国番茄黄化曲叶病毒(TYLCTHV;GenBank登录号EF577266和EF577267)各自的DNA-A和DNA-B的核苷酸序列同一性最高,均为99%,TYLCTHV是台湾最近出现的一种感染番茄的双分体双生病毒(3)。根据DNA-A序列比较以及国际病毒分类委员会以89%序列同一性划分物种的标准,这些病毒分离物属于TYLCTHV物种。发现分离物P2-4可通过粉虱(烟粉虱生物型B)传播给辣椒品种“Early Calwonder”,并引发与辣椒田间观察到的相同叶片卷曲、起泡和轻度叶脉黄化症状。据我们所知,这是台湾双生病毒感染辣椒的首次报道。在辣椒病害管理以及为台湾培育抗双生病毒辣椒品种时,应考虑主要辣椒产区TYLCTHV的存在。参考文献:(1)R. W. Briddon等人,《分子生物技术》20:315,2002年。(2)S. K. Green等人,《植物病害》85:1286,2001年。(3)F.-J. Jan等人,《植物病害》91:1363,2007年。(4)M. R. Rojas等人,《植物病害》77:340، 1993年。