Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2522, Australia.
Illawarra Health and Medical Research Institute, Wollongong, New South Wales 2522, Australia.
Nucleic Acids Res. 2019 May 7;47(8):4111-4123. doi: 10.1093/nar/gkz090.
Single-stranded DNA-binding proteins (SSBs) support DNA replication by protecting single-stranded DNA from nucleolytic attack, preventing intra-strand pairing events and playing many other regulatory roles within the replisome. Recent developments in single-molecule approaches have led to a revised picture of the replisome that is much more complex in how it retains or recycles protein components. Here, we visualize how an in vitro reconstituted Escherichia coli replisome recruits SSB by relying on two different molecular mechanisms. Not only does it recruit new SSB molecules from solution to coat newly formed single-stranded DNA on the lagging strand, but it also internally recycles SSB from one Okazaki fragment to the next. We show that this internal transfer mechanism is balanced against recruitment from solution in a manner that is concentration dependent. By visualizing SSB dynamics in live cells, we show that both internal transfer and external exchange mechanisms are physiologically relevant.
单链 DNA 结合蛋白(SSBs)通过保护单链 DNA 免受核酸酶攻击、防止链内配对事件以及在复制体中发挥许多其他调节作用来支持 DNA 复制。单分子方法的最新进展导致了对复制体的修正认识,其在保留或回收蛋白成分方面要复杂得多。在这里,我们通过依赖两种不同的分子机制来可视化体外重组的大肠杆菌复制体如何招募 SSB。它不仅从溶液中招募新的 SSB 分子来覆盖滞后链上新形成的单链 DNA,而且还在内部将 SSB 从一个冈崎片段循环到下一个。我们表明,这种内部转移机制与从溶液中招募的机制相平衡,这是浓度依赖性的。通过在活细胞中可视化 SSB 动力学,我们表明内部转移和外部交换机制都是生理相关的。