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美洲地区EBV的系统发育地理多样性与混合血统——人类与病原体协同进化中断的另一种模式

The Phylogeographic Diversity of EBV and Admixed Ancestry in the Americas⁻Another Model of Disrupted Human-Pathogen Co-Evolution.

作者信息

Corvalán Alejandro H, Ruedlinger Jenny, de Mayo Tomas, Polakovicova Iva, Gonzalez-Hormazabal Patricio, Aguayo Francisco

机构信息

Department of Hematology and Oncology, Pontificia Universidad Catolica de Chile, Santiago 8330034, Chile.

Advanced Center for Chronic Diseases (ACCDiS), Pontificia Universidad Catolica de Chile, Santiago 8330034, Chile.

出版信息

Cancers (Basel). 2019 Feb 14;11(2):217. doi: 10.3390/cancers11020217.

Abstract

Epstein-Barr virus (EBV) is an etiological agent for gastric cancer with significant worldwide variations. Molecular characterizations of EBV have shown phylogeographical variations among healthy populations and in EBV-associated diseases, particularly the cosegregated BamHI-I fragment and XhoI restriction site of exon 1 of the gene. In the Americas, both cosegregated variants are present in EBV carriers, which aligns with the history of Asian and European human migration to this continent. Furthermore, novel recombinant variants have been found, reflecting the genetic makeup of this continent. However, in the case of EBV-associated gastric cancer (EBV-associated GC), the cosegregated European BamHI-"i" fragment and XhoI restriction site strain prevails. Thus, we propose that a disrupted coevolution between viral phylogeographical strains and mixed human ancestry in the Americas might explain the high prevalence of this particular gastric cancer subtype. This cosegregated region contains two relevant transcripts for EBV-associated GC, the -1 and miR-BARTs. Thus, genome-wide association studies (GWAS) or targeted sequencing of both transcripts may be required to clarify their role as a potential source of this disrupted coevolution.

摘要

爱泼斯坦-巴尔病毒(EBV)是一种导致胃癌的病原体,在全球范围内存在显著差异。EBV的分子特征显示,健康人群以及EBV相关疾病中存在系统发育地理差异,特别是该基因外显子1的共分离BamHI-I片段和XhoI限制性酶切位点。在美洲,EBV携带者中同时存在这两种共分离变异,这与亚洲和欧洲人类向该大陆的迁移历史相符。此外,还发现了新的重组变异,反映了该大陆的基因构成。然而,在EBV相关胃癌(EBV相关GC)中,共分离的欧洲BamHI-“i”片段和XhoI限制性酶切位点菌株占主导地位。因此,我们认为美洲病毒系统发育地理菌株与混合人类血统之间的协同进化中断可能解释了这种特定胃癌亚型的高患病率。这个共分离区域包含两个与EBV相关GC相关的转录本,即-1和miR-BARTs。因此,可能需要进行全基因组关联研究(GWAS)或对这两个转录本进行靶向测序,以阐明它们作为这种协同进化中断潜在来源的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e46/6406347/0117fe5e79bf/cancers-11-00217-g001.jpg

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