Mao Xuemei, Wu Tao, Kou Yaping, Shi Ying, Zhang Yu, Liu Jin
1Laboratory for Algae Biotechnology & Innovation, College of Engineering, Peking University, Beijing, 100871 China.
2BIC-ESAT, College of Engineering, Peking University, Beijing, 100871 China.
Biotechnol Biofuels. 2019 Feb 11;12:28. doi: 10.1186/s13068-019-1366-2. eCollection 2019.
The green alga has been recognized as an industrially relevant strain because of its robust growth under multiple trophic conditions and the potential for simultaneous production of triacylglycerol (TAG) and the high-value keto-carotenoid astaxanthin. Nevertheless, the mechanism of TAG synthesis remains poorly understood in . Diacylglycerol acyltransferase (DGAT) is thought to catalyze the committed step of TAG assembly in the Kennedy pathway. genome is predicted to possess eleven putative DGAT-encoding genes, the greatest number ever found in green algae, pointing to the complexity of TAG assembly in the alga.
The transcription start site of s was determined by 5'-rapid amplification of cDNA ends (RACE), and their coding sequences were cloned and verified by sequencing, which identified ten genes (two type I s designated as and , and eight type II s designated as through ) and revealed that the previous gene models of seven s were incorrect. Function complementation in the TAG-deficient yeast strain confirmed the functionality of most DGATs, with CzDGAT1A and CzDGTT5 having the highest activity. In vitro DGAT assay revealed that CzDGAT1A and CzDGTT5 preferred eukaryotic and prokaryotic diacylglycerols (DAGs), respectively, and had overlapping yet distinctive substrate specificity for acyl-CoAs. Subcellular co-localization experiment in tobacco leaves indicated that both CzDGAT1A and CzDGTT5 were localized at endoplasmic reticulum (ER). Upon nitrogen deprivation, TAG was drastically induced in , accompanied by a considerable up-regulation of and . These two genes were probably regulated by the transcription factors (TFs) bZIP3 and MYB1, as suggested by the yeast one-hybrid assay and expression correlation. Moreover, heterologous expression of and promoted TAG accumulation and TAG yield in different hosts including yeast and oleaginous alga.
Our study represents a pioneering work on the characterization of both type I and type II s by systematically integrating functional complementation, in vitro enzymatic assay, subcellular localization, yeast one-hybrid assay and overexpression in yeast and oleaginous alga. These results (1) update the gene models of s, (2) shed light on the mechanism of oleaginousness in which CzDGAT1A and CzDGTT5, have functional complementarity and probably work in collaboration at ER contributing to the abundance and complexity of TAG, and (3) provide engineering targets for future trait improvement via rational manipulation of this alga as well as other industrially relevant ones.
这种绿藻已被公认为具有工业相关性的菌株,因为它在多种营养条件下生长旺盛,并且有同时生产三酰甘油(TAG)和高价值酮类胡萝卜素虾青素的潜力。然而,在该绿藻中,TAG合成的机制仍知之甚少。二酰甘油酰基转移酶(DGAT)被认为催化肯尼迪途径中TAG组装的关键步骤。该绿藻基因组预计拥有11个假定的编码DGAT的基因,这是在绿藻中发现的数量最多的,表明该藻类中TAG组装的复杂性。
通过5'-cDNA末端快速扩增(RACE)确定了某绿藻DGAT的转录起始位点,克隆了它们的编码序列并通过测序进行了验证,鉴定出10个DGAT基因(两个I型DGAT分别命名为CzDGAT1A和CzDGAT1B,八个II型DGAT分别命名为CzDGTT1至CzDGTT8),并揭示了7个DGAT先前的基因模型是错误的。在TAG缺陷型酵母菌株中的功能互补证实了大多数DGAT的功能,其中CzDGAT1A和CzDGTT5活性最高。体外DGAT测定表明,CzDGAT1A和CzDGTT5分别偏好真核和原核二酰甘油(DAG),并且对酰基辅酶A具有重叠但独特的底物特异性。烟草叶片中的亚细胞共定位实验表明,CzDGAT1A和CzDGTT5都定位于内质网(ER)。在氮缺乏时,该绿藻中TAG大量积累,同时CzDGAT1A和CzDGTT5显著上调。酵母单杂交试验和表达相关性表明,这两个基因可能受转录因子(TFs)bZIP3和MYB1调控。此外,CzDGAT1A和CzDGTT5在包括酵母和油藻在内的不同宿主中的异源表达促进了TAG积累和TAG产量。
我们的研究通过系统整合功能互补、体外酶活性测定、亚细胞定位、酵母单杂交试验以及在酵母和油藻中的过表达,对I型和II型DGAT进行了表征,是一项开创性工作。这些结果(1)更新了DGAT的基因模型;(2)揭示了油脂生成机制,其中CzDGAT1A和CzDGTT5具有功能互补性,可能在内质网协同作用,导致TAG的丰富和复杂;(3)为通过合理操纵该藻类以及其他具有工业相关性的藻类来改善未来性状提供了工程靶点。