• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Complete Genome Sequences of Human Astrovirus Prototype Strains (Types 1 to 8).人星状病毒原型株(1至8型)的全基因组序列
Microbiol Resour Announc. 2019 Feb 14;8(7). doi: 10.1128/MRA.01611-18. eCollection 2019 Feb.
2
Genomic characterization of human astrovirus type 6 Katano virus and the establishment of a rapid and effective reverse transcription-polymerase chain reaction to detect all serotypes of human astrovirus.
J Med Virol. 2000 May;61(1):125-31. doi: 10.1002/(sici)1096-9071(200005)61:1<125::aid-jmv20>3.0.co;2-b.
3
Prevalence and genome characteristics of canine astrovirus in southwest China.中国西南地区犬星状病毒的流行情况和基因组特征。
J Gen Virol. 2018 Jul;99(7):880-889. doi: 10.1099/jgv.0.001077.
4
Full genome analysis of bovine astrovirus from fecal samples of cattle in Japan: identification of possible interspecies transmission of bovine astrovirus.日本牛粪便样本中牛星状病毒的全基因组分析:牛星状病毒可能的种间传播鉴定
Arch Virol. 2015 Oct;160(10):2491-501. doi: 10.1007/s00705-015-2543-7. Epub 2015 Jul 28.
5
Genetically highly divergent RNA virus with astrovirus-like (5'-end) and hepevirus-like (3'-end) genome organization in carnivorous birds, European roller (Coracias garrulus).在食肉类鸟类,欧洲红隼中发现一种与星状病毒(5'-端)和杯状病毒(3'-端)具有高度基因差异的 RNA 病毒,具有类似的基因组结构。
Infect Genet Evol. 2019 Jul;71:215-223. doi: 10.1016/j.meegid.2019.04.003. Epub 2019 Apr 6.
6
High evolutionary rate of human astrovirus.人类星状病毒的高进化率。
Infect Genet Evol. 2012 Mar;12(2):435-42. doi: 10.1016/j.meegid.2012.01.019. Epub 2012 Feb 1.
7
Viral metagenomics of fecal samples from non-human primates revealed human astrovirus in a chimpanzee, China.对来自中国一只黑猩猩的非人灵长类动物粪便样本进行的病毒宏基因组学研究发现了人星状病毒。
Gut Pathog. 2016 Nov 8;8:53. doi: 10.1186/s13099-016-0140-2. eCollection 2016.
8
Genome analysis of canine astroviruses reveals genetic heterogeneity and suggests possible inter-species transmission.犬星状病毒的基因组分析揭示了遗传异质性,并提示了可能的种间传播。
Virus Res. 2017 Mar 15;232:162-170. doi: 10.1016/j.virusres.2016.12.005. Epub 2016 Dec 10.
9
Different rates of (non-)synonymous mutations in astrovirus genes; correlation with gene function.星状病毒基因中(非)同义突变的不同速率;与基因功能的相关性。
Virol J. 2007 Mar 7;4:25. doi: 10.1186/1743-422X-4-25.
10
Complete genome sequence analysis of chicken astrovirus isolate from India.来自印度的鸡星状病毒分离株的全基因组序列分析
Vet Res Commun. 2017 Mar;41(1):67-75. doi: 10.1007/s11259-016-9673-6. Epub 2016 Dec 23.

引用本文的文献

1
Near-complete genome sequence of human astrovirus recovered from a child with acute flaccid paralysis in Guinea, 2021.2021年从几内亚一名急性弛缓性麻痹儿童体内分离出的人星状病毒近乎完整的基因组序列
Microbiol Resour Announc. 2023 Oct 19;12(10):e0021423. doi: 10.1128/MRA.00214-23. Epub 2023 Sep 29.
2
The Roles of the 5' and 3' Untranslated Regions in Human Astrovirus Replication.5' 和 3' 非翻译区在人星状病毒复制中的作用。
Viruses. 2023 Jun 20;15(6):1402. doi: 10.3390/v15061402.

本文引用的文献

1
Scaling read aligners to hundreds of threads on general-purpose processors.在通用处理器上将读取对齐器扩展到数百个线程。
Bioinformatics. 2019 Feb 1;35(3):421-432. doi: 10.1093/bioinformatics/bty648.
2
Norovirus, astrovirus, and sapovirus among immunocompromised patients at a tertiary care research hospital.一家三级医疗研究医院中免疫功能低下患者的诺如病毒、星状病毒和札幌病毒感染情况
Diagn Microbiol Infect Dis. 2018 Oct;92(2):143-146. doi: 10.1016/j.diagmicrobio.2018.05.017. Epub 2018 May 29.
3
Astrovirus infection in hospitalized children: Molecular, clinical and epidemiological features.住院儿童的星状病毒感染:分子、临床和流行病学特征
J Clin Virol. 2017 Sep;94:79-85. doi: 10.1016/j.jcv.2017.07.014. Epub 2017 Jul 25.
4
Characterization of astrovirus-associated gastroenteritis in hospitalized children under five years of age.五岁以下住院儿童中星状病毒相关性肠胃炎的特征分析
Infect Genet Evol. 2017 Sep;53:94-99. doi: 10.1016/j.meegid.2017.05.016. Epub 2017 May 20.
5
High-Throughput Next-Generation Sequencing of Polioviruses.脊髓灰质炎病毒的高通量下一代测序
J Clin Microbiol. 2017 Feb;55(2):606-615. doi: 10.1128/JCM.02121-16. Epub 2016 Dec 7.
6
An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data.一种可显著改进从宏基因组新一代测序数据中进行微生物基因组从头组装的整合策略。
Nucleic Acids Res. 2015 Apr 20;43(7):e46. doi: 10.1093/nar/gkv002. Epub 2015 Jan 13.
7
Human astroviruses.人星状病毒
Clin Microbiol Rev. 2014 Oct;27(4):1048-74. doi: 10.1128/CMR.00013-14.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
Epidemiology of astrovirus infection in children.儿童星状病毒感染的流行病学
Korean J Pediatr. 2012 Mar;55(3):77-82. doi: 10.3345/kjp.2012.55.3.77. Epub 2012 Mar 16.
10
Fast gapped-read alignment with Bowtie 2.快速缺口读对准与 Bowtie 2。
Nat Methods. 2012 Mar 4;9(4):357-9. doi: 10.1038/nmeth.1923.

人星状病毒原型株(1至8型)的全基因组序列

Complete Genome Sequences of Human Astrovirus Prototype Strains (Types 1 to 8).

作者信息

Castro Christina J, Reynolds Emily, Monroe Stephan S, Marine Rachel L, Vinjé Jan

机构信息

Oak Ridge Institute for Science and Education, Oak Ridge, Tennessee, USA.

Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

出版信息

Microbiol Resour Announc. 2019 Feb 14;8(7). doi: 10.1128/MRA.01611-18. eCollection 2019 Feb.

DOI:10.1128/MRA.01611-18
PMID:30801067
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6376426/
Abstract

We report the complete genome sequences of the eight human astrovirus Oxford prototype strains. These sequences share 94.9% to 99.9% nucleotide identity with open reading frame 2 (ORF2) genes of astrovirus genomes previously deposited in GenBank and include the first complete genome of human astrovirus type 7.

摘要

我们报告了8株人星状病毒牛津原型株的全基因组序列。这些序列与先前存入GenBank的星状病毒基因组的开放阅读框2(ORF2)基因具有94.9%至99.9%的核苷酸同一性,其中包括7型人星状病毒的首个完整基因组。