Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China.
State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China.
Thorac Cancer. 2019 Apr;10(4):715-727. doi: 10.1111/1759-7714.12989. Epub 2019 Feb 25.
Although cigarette smoking is considered one of the key risk factors for lung cancer, 15% of male patients and 53% of female patients with lung cancer are non-smokers. Metabolic changes are critical features of cancer. Therapeutic target identification from a metabolic perspective in non-small cell lung cancer (NSCLC) tissue of female non-smokers has long been ignored.
Based on microarray data retrieved from Affymetrix expression arrays E-GEOD-19804, we found that the downregulated genes in non-smoking female NSCLC patients tended to participate in protein/amino acid and lipid metabolism, while upregulated genes were more involved in protein/amino acid and carbohydrate metabolism. Combining nutrient metabolic co-expression, protein-protein interaction network construction and overall survival assessment, we identified NR4A1 and TIE1 as potential therapeutic targets for NSCLC in female non-smokers. To accelerate the drug development for non-smoking female NSCLC patients, we identified nilotinib as a potential agonist targeting NR4A1 encoded protein by molecular docking and molecular dynamic stimulation. We also show that nilotinib inhibited proliferation and induced senescence of cells in non-smoking female NSCLC patients in vitro.
These results not only uncover nutrient metabolic characteristics in non-smoking female NSCLC patients, but also provide a new paradigm for identifying new targets and drugs for novel therapy for such patients.
尽管吸烟被认为是肺癌的主要风险因素之一,但 15%的男性肺癌患者和 53%的女性肺癌患者为不吸烟者。代谢变化是癌症的关键特征。长期以来,从代谢角度对女性非吸烟非小细胞肺癌(NSCLC)组织中的治疗靶点进行鉴定一直被忽视。
基于从 Affymetrix 表达谱芯片 E-GEOD-19804 检索到的微阵列数据,我们发现不吸烟的女性 NSCLC 患者中下调的基因倾向于参与蛋白质/氨基酸和脂质代谢,而上调的基因则更多地参与蛋白质/氨基酸和碳水化合物代谢。结合营养代谢共表达、蛋白质-蛋白质相互作用网络构建和总体生存评估,我们确定 NR4A1 和 TIE1 是女性非吸烟 NSCLC 患者潜在的治疗靶点。为了加速针对非吸烟女性 NSCLC 患者的药物开发,我们通过分子对接和分子动力学刺激鉴定出 nilotinib 是一种针对 NR4A1 编码蛋白的潜在激动剂。我们还表明,nilotinib 在体外抑制了非吸烟女性 NSCLC 患者的细胞增殖并诱导其衰老。
这些结果不仅揭示了不吸烟的女性 NSCLC 患者的营养代谢特征,还为鉴定此类患者的新靶点和新药提供了新的范例。