Laboratory of Environmental Pollution Analysis, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096 Warsaw, Poland.
Department of Virology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096 Warsaw, Poland.
Int J Mol Sci. 2019 Feb 26;20(5):1018. doi: 10.3390/ijms20051018.
sp. O23S is a dissimilatory arsenate reducing bacterial strain involved in arsenic transformations within the abandoned gold mine in Zloty Stok (SW Poland). Previous physiological studies revealed that O23S may not only release arsenic from minerals, but also facilitate its immobilization through co-precipitation with reduced sulfur species. Given these uncommon, complementary characteristics and the application potential of the strain in arsenic-removal technologies, its genome (~5.3 Mbp), consisting of a single chromosome, two large plasmids (pSheA and pSheB) and three small plasmid-like phages (pSheC-E) was sequenced and annotated. Genes encoding putative proteins involved in heavy metal transformations, antibiotic resistance and other phenotypic traits were identified. An in-depth comparative analysis of arsenic respiration () and resistance () genes and their genetic context was also performed, revealing that pSheB carries the only copy of the genes, and a complete operon. The plasmid pSheB is therefore a unique natural vector of these genes, providing the host cells arsenic respiration and resistance abilities. The functionality of the identified genes was determined based on the results of the previous and additional physiological studies, including: the assessment of heavy metal and antibiotic resistance under various conditions, adhesion-biofilm formation assay and Biolog metabolic preferences test. This combined genetic and physiological approach shed a new light on the capabilities of O23S and their molecular basis, and helped to confirm the biosafety of the strain in relation to its application in bioremediation technologies.
O23S 是一种异化砷酸盐还原细菌菌株,参与了位于波兰西南部 Zloty Stok 废弃金矿中的砷转化过程。先前的生理研究表明,O23S 不仅可以从矿物中释放砷,还可以通过与还原硫物种共沉淀来促进其固定。鉴于该菌株具有这些不常见的、互补的特征以及在除砷技术中的应用潜力,我们对其基因组(约 530 万碱基对)进行了测序和注释,该基因组由一条染色体、两个大型质粒(pSheA 和 pSheB)和三个小型质粒样噬菌体(pSheC-E)组成。鉴定了编码涉及重金属转化、抗生素抗性和其他表型特征的假定蛋白的基因。还对砷呼吸(arsenic respiration)和抗性(arsenic resistance)基因及其遗传背景进行了深入的比较分析,结果表明 pSheB 携带唯一的 基因副本和完整的 操纵子。因此,质粒 pSheB 是这些基因的独特天然载体,赋予宿主细胞砷呼吸和抗性能力。基于先前和其他生理研究的结果,确定了鉴定基因的功能,包括:在各种条件下评估重金属和抗生素抗性、粘附-生物膜形成测定和 Biolog 代谢偏好测试。这种综合的遗传和生理方法揭示了 O23S 的能力及其分子基础的新视角,并有助于确认该菌株在生物修复技术中的应用的生物安全性。