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基于根结线虫不同群体对分离株的寄生反应,利用PCR-RFLP分析其遗传变异性

Genetic Variability among Different Populations of Root Knot Nematodes Based on Their Encumbrance Response to Isolates Using PCR-RFLP.

作者信息

Kamran Muhammad, Javed Nazir, Ullah Ihsan, Nazir Shahid, Jamil Shakra, Iqbal Muhammad Zafar, Abbas Huma, Khan Sajid Aleem, Ehetisham Ul Haq Muhammad

机构信息

Plant Pathology Research Institute, Ayub Agricultural Research Institute Faisalabad, 38000, Punjab, Pakistan.

Department of Plant Pathology, University of Agriculture Faisalabad, 38040, Punjab, Pakistan.

出版信息

Plant Pathol J. 2019 Feb;35(1):51-62. doi: 10.5423/PPJ.OA.11.2017.0253. Epub 2019 Feb 1.

DOI:10.5423/PPJ.OA.11.2017.0253
PMID:30828279
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6385655/
Abstract

A great variable response was observed when PP-3 and PP-J encumbered with 116 populations of root knot nematode (RKN) at two different temperatures (25 ± 2°C and 30 ± 2°C) and concentrations (10 and 10 spores/ml). The PCR reaction amplified intergenic region between cytochrome oxidase subunit II gene (COII) and large subunit of rRNA gene (lrRNA) of the mitochondrial genome of different RKN species. The primer C2F3 and 1108 identified with the highest frequency (52.6%) followed by (36.8%) and (10.5%). The sizes of PCR products were 1.7 kb for and populations while populations of produced 1.1 kb fragment. The digestion with I yielded three different fragment length patterns on 1.5 % agarose gel. From current research it is concluded that intra- genetic variability exist in RKN populations which have better encumbrance with .

摘要

当PP - 3和PP - J在两种不同温度(25±2°C和30±2°C)和浓度(10和10孢子/毫升)下对116个根结线虫(RKN)种群进行抑制时,观察到了很大的可变反应。PCR反应扩增了不同RKN物种线粒体基因组中细胞色素氧化酶亚基II基因(COII)和rRNA基因大亚基(lrRNA)之间的基因间隔区。引物C2F3和1108的识别频率最高(52.6%),其次是(36.8%)和(10.5%)。对于和种群,PCR产物的大小为1.7 kb,而种群产生1.1 kb的片段。用I进行酶切在1.5%琼脂糖凝胶上产生了三种不同的片段长度模式。从当前研究得出结论,RKN种群中存在遗传变异性,其对具有更好的抑制作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/ee256fdf62d5/ppj-35-051f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/6e6cd3156eac/ppj-35-051f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/104ef293ccdb/ppj-35-051f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/b89f60cb8f0c/ppj-35-051f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/ee256fdf62d5/ppj-35-051f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/6e6cd3156eac/ppj-35-051f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/104ef293ccdb/ppj-35-051f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/b89f60cb8f0c/ppj-35-051f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9df/6385655/ee256fdf62d5/ppj-35-051f4.jpg

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8
Temperature Effects on the Attachment of Pasteuria penetrans Endospores to Meloidogyne arenaria Race 1.温度对穿透巴氏杆菌内生孢子附着到南方根结线虫1号小种的影响
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9
Suppression Mechanisms of Meloidogyne arenaria Race 1 by Pasteuria penetrans.穿透巴氏杆菌对南方根结线虫1号小种的抑制机制
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Assessing nuclear and mitochondrial DNA sequence variation within steinernema (rhabditida: steinernematidae).评估斯氏线虫属(小杆目:斯氏线虫科)内的核DNA和线粒体DNA序列变异。
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