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利用优化的机器学习模型和个人特征数据增强自闭症诊断

Enhancing Diagnosis of Autism With Optimized Machine Learning Models and Personal Characteristic Data.

作者信息

Parikh Milan N, Li Hailong, He Lili

机构信息

Perinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, United States.

Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, United States.

出版信息

Front Comput Neurosci. 2019 Feb 15;13:9. doi: 10.3389/fncom.2019.00009. eCollection 2019.

Abstract

Autism spectrum disorder (ASD) is a developmental disorder, affecting about 1% of the global population. Currently, the only clinical method for diagnosing ASD are standardized ASD tests which require prolonged diagnostic time and increased medical costs. Our objective was to explore the predictive power of personal characteristic data (PCD) from a large well-characterized dataset to improve upon prior diagnostic models of ASD. We extracted six personal characteristics (age, sex, handedness, and three individual measures of IQ) from 851 subjects in the Autism Brain Imaging Data Exchange (ABIDE) database. ABIDE is an international collaborative project that collected data from a large number of ASD patients and typical non-ASD controls from 17 research and clinical institutes. We employed this publicly available database to test nine supervised machine learning models. We implemented a cross-validation strategy to train and test those machine learning models for classification between typical non-ASD controls and ASD patients. We assessed classification performance using accuracy, sensitivity, specificity, and area under the receiver operating characteristic curve (AUC). Of the nine models we tested using six personal characteristics, the neural network model performed the best with a mean AUC (SD) of 0.646 (0.005), followed by k-nearest neighbor with a mean AUC (SD) of 0.641 (0.004). This study established an optimal ASD classification performance with PCD as features. With additional discriminative features (e.g., neuroimaging), machine learning models may ultimately enable automated clinical diagnosis of autism.

摘要

自闭症谱系障碍(ASD)是一种发育障碍,影响着全球约1%的人口。目前,诊断ASD的唯一临床方法是标准化的ASD测试,这需要较长的诊断时间并增加医疗成本。我们的目标是探索来自一个特征明确的大型数据集的个人特征数据(PCD)的预测能力,以改进先前的ASD诊断模型。我们从自闭症脑成像数据交换(ABIDE)数据库的851名受试者中提取了六个个人特征(年龄、性别、利手和三项智商个体测量值)。ABIDE是一个国际合作项目,从17个研究和临床机构收集了大量ASD患者和典型非ASD对照的数据。我们利用这个公开可用的数据库测试了九个监督机器学习模型。我们实施了交叉验证策略来训练和测试这些机器学习模型,以对典型非ASD对照和ASD患者进行分类。我们使用准确率、敏感性、特异性和受试者工作特征曲线下面积(AUC)来评估分类性能。在我们使用六个个人特征测试的九个模型中,神经网络模型表现最佳,平均AUC(标准差)为0.646(0.005),其次是k近邻模型,平均AUC(标准差)为0.641(0.004)。本研究以PCD为特征建立了最佳的ASD分类性能。有了额外的判别特征(如神经影像学),机器学习模型最终可能实现自闭症的自动化临床诊断。

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The diagnosis of ASD using multiple machine learning techniques.使用多种机器学习技术诊断自闭症谱系障碍。
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