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基于 DNA 的合成原细胞群体中的通讯。

DNA-based communication in populations of synthetic protocells.

机构信息

Laboratory of Chemical Biology, Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands.

Institute for Complex Molecular Systems, Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands.

出版信息

Nat Nanotechnol. 2019 Apr;14(4):369-378. doi: 10.1038/s41565-019-0399-9. Epub 2019 Mar 4.

Abstract

Developing molecular communication platforms based on orthogonal communication channels is a crucial step towards engineering artificial multicellular systems. Here, we present a general and scalable platform entitled 'biomolecular implementation of protocellular communication' (BIO-PC) to engineer distributed multichannel molecular communication between populations of non-lipid semipermeable microcapsules. Our method leverages the modularity and scalability of enzyme-free DNA strand-displacement circuits to develop protocellular consortia that can sense, process and respond to DNA-based messages. We engineer a rich variety of biochemical communication devices capable of cascaded amplification, bidirectional communication and distributed computational operations. Encapsulating DNA strand-displacement circuits further allows their use in concentrated serum where non-compartmentalized DNA circuits cannot operate. BIO-PC enables reliable execution of distributed DNA-based molecular programs in biologically relevant environments and opens new directions in DNA computing and minimal cell technology.

摘要

基于正交通信信道开发分子通信平台是工程人工多细胞系统的关键步骤。在这里,我们提出了一个通用的、可扩展的平台,名为“原细胞通信的生物分子实现”(BIO-PC),用于工程非脂半透微囊群体之间的分布式多通道分子通信。我们的方法利用无酶 DNA 链置换电路的模块化和可扩展性来开发原细胞联合体,使其能够感知、处理和响应基于 DNA 的消息。我们设计了各种生化通信设备,能够进行级联放大、双向通信和分布式计算操作。封装 DNA 链置换电路还允许它们在浓缩血清中使用,而无隔室 DNA 电路无法在浓缩血清中运行。BIO-PC 能够在生物相关环境中可靠地执行分布式基于 DNA 的分子程序,并为 DNA 计算和最小细胞技术开辟新的方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be4b/6451639/ffe703c48daf/emss-81460-f001.jpg

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