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全基因组研究欧洲裔美国女性阿片类药物依赖的表观遗传生物标志物。

Genomewide Study of Epigenetic Biomarkers of Opioid Dependence in European- American Women.

机构信息

Division of Human Genetics, Department of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.

VA CT Healthcare Center, West Haven, CT, USA.

出版信息

Sci Rep. 2019 Mar 15;9(1):4660. doi: 10.1038/s41598-019-41110-7.

Abstract

There is currently an epidemic of opioid use, overdose, and dependence in the United States. Although opioid dependence (OD) is more prevalent in men, opioid relapse and fatal opioid overdoses have recently increased at a higher rate among women. Epigenetic mechanisms have been implicated in the etiology of OD, though most studies to date have used candidate gene approaches. We conducted the first epigenome-wide association study (EWAS) of OD in a sample of 220 European-American (EA) women (140 OD cases, 80 opioid-exposed controls). DNA was derived from whole blood samples and EWAS was implemented using the Illumina Infinium HumanMethylationEPIC array. To identify differentially methylated CpG sites, we performed an association analysis adjusting for age, estimates of cell proportions, smoking status, and the first three principal components to correct for population stratification. After correction for multiple testing, association analysis identified three genome-wide significant differentially methylated CpG sites mapping to the PARG, RERE, and CFAP77 genes. These genes are involved in chromatin remodeling, DNA binding, cell survival, and cell projection. Previous genome-wide association studies have identified RERE risk variants in association with psychiatric disorders and educational attainment. DNA methylation age in the peripheral blood did not differ between OD subjects and opioid-exposed controls. Our findings implicate epigenetic mechanisms in OD and, if replicated, identify possible novel peripheral biomarkers of OD that could inform the prevention and treatment of the disorder.

摘要

目前,美国阿片类药物的使用、过量用药和依赖现象十分普遍。尽管阿片类药物依赖(OD)在男性中更为普遍,但最近女性的阿片类药物复发和致命阿片类药物过量的比例却在不断上升。表观遗传机制已被认为与 OD 的病因有关,但迄今为止,大多数研究都采用了候选基因方法。我们在一个由 220 名欧洲裔美国女性(140 名 OD 病例,80 名阿片类药物暴露对照)组成的样本中进行了首次 OD 的全基因组关联研究(EWAS)。DNA 来源于全血样本,使用 Illumina Infinium HumanMethylationEPIC 阵列进行 EWAS。为了鉴定差异甲基化的 CpG 位点,我们进行了关联分析,在调整年龄、细胞比例估计值、吸烟状况和前三个主成分后,以纠正人口分层。在多重检验校正后,关联分析确定了三个全基因组显著差异甲基化的 CpG 位点,这些位点映射到 PARG、RERE 和 CFAP77 基因上。这些基因参与染色质重塑、DNA 结合、细胞存活和细胞投射。先前的全基因组关联研究已经确定了 RERE 风险变异与精神疾病和教育程度有关。OD 受试者和阿片类药物暴露对照之间外周血的 DNA 甲基化年龄没有差异。我们的研究结果表明,表观遗传机制在 OD 中起作用,如果得到复制,可能会确定出 OD 的新的潜在外周生物标志物,为该疾病的预防和治疗提供信息。

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