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六核苷五磷酸d(br5CGbr5CGbr5CG)的Z构象的热稳定性:熔解前构象转变的证据。

Thermal stability of the Z conformation of the hexanucleoside pentaphosphate d(br5CGbr5CGbr5CG): evidence for a conformational transition before melting.

作者信息

Hartmann B, Genest D, Thuong N T, Ptak M, Leng M

出版信息

Biochimie. 1986 May;68(5):739-43. doi: 10.1016/s0300-9084(86)80168-7.

DOI:10.1016/s0300-9084(86)80168-7
PMID:3089332
Abstract

The thermal stability of the hexanucleoside pentaphosphate d(br5CGbr5CGbr5CG) has been studied at two nucleotide concentrations, in the presence of 1 M NaClO4. At low nucleotide concentration (7 X 10(-5) M), circular dichroism experiments show a conformational transition from the Z conformation to another conformation, named X, which is not the B conformation, as the temperature is increased from 0 to 35 degrees C. Between 40 and 65 degrees C, another transition is observed which corresponds to the melting of the X conformation. At higher nucleotide concentration (2 X 10(-3) M), circular dichroism and 31P nuclear magnetic resonance experiments show that at low temperature (br5dC-dG)3 adopts the Z conformation. There are associations between the oligonucleotides which progressively disappear as the temperature increases. In the range 35-60 degrees C a transition from the Z conformation to another conformation is observed. This new conformation is the X conformation detected at low nucleotide concentration.

摘要

在1 M高氯酸钠存在的情况下,研究了六核苷五磷酸d(br5CGbr5CGbr5CG)在两种核苷酸浓度下的热稳定性。在低核苷酸浓度(7×10⁻⁵ M)时,圆二色性实验表明,随着温度从0℃升高到35℃,会发生从Z构象到另一种构象(称为X构象,而非B构象)的构象转变。在40℃至65℃之间,观察到另一种转变,这对应于X构象的解链。在较高核苷酸浓度(2×10⁻³ M)时,圆二色性和³¹P核磁共振实验表明,在低温下(br5dC-dG)3采用Z构象。寡核苷酸之间存在缔合,随着温度升高,这种缔合会逐渐消失。在35 - 60℃范围内,观察到从Z构象到另一种构象的转变。这种新构象就是在低核苷酸浓度下检测到的X构象。

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引用本文的文献

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Nucleic Acids Res. 1987 Jul 24;15(14):5629-42. doi: 10.1093/nar/15.14.5629.