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(m5dC-dG)3的光谱研究:B型和Z型的热稳定性

Spectroscopic studies of (m5dC-dG)3: thermal stability of B- and Z-forms.

作者信息

Hartmann B, Thuong N T, Pouyet J, Ptak M, Leng M

出版信息

Nucleic Acids Res. 1983 Jul 11;11(13):4453-66. doi: 10.1093/nar/11.13.4453.

DOI:10.1093/nar/11.13.4453
PMID:6866770
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326058/
Abstract

The hexanucleoside pentaphosphate d(m5CpGpm5CpGpm5CpG) has been studied in solution by ultra-violet absorption, circular dichroism and 31P nuclear magnetic resonance under various experimental conditions. In 0.2 M NaClO4 at low temperature, an hexamer duplex is formed which has a B or B-like conformation. As the salt concentration is increased, a transition from a B-form to the Z-form occurs and is complete in 3 M NaClO4. In 3 M NaClO4, the behavior of the Z double helix is complex as a function of temperature. The variation of the circular dichroism at 295 nm is biphasic. A first transition occurs over a large range of temperature and corresponds to a conformational change due to a non-cooperative intramolecular process. Ultra-violet absorption and 31P nuclear magnetic resonance show that the new conformation arising from a distortion of the backbone is not similar to that observed in low salt conditions (B-form). At high hexanucleotide concentration, aggregates are formed. The second transition is cooperative and corresponds to the melting of a double stranded helix into single strands.

摘要

已通过紫外吸收、圆二色性和³¹P核磁共振在各种实验条件下对六核苷五磷酸d(m⁵CpGpm⁵CpGpm⁵CpG)在溶液中的情况进行了研究。在低温下的0.2 M高氯酸钠中,形成了具有B或类B构象的六聚体双链体。随着盐浓度的增加,会发生从B型到Z型的转变,在3 M高氯酸钠中转变完成。在3 M高氯酸钠中,Z型双螺旋的行为随温度变化较为复杂。295 nm处圆二色性的变化是双相的。第一个转变在较大温度范围内发生,对应于由于非协同分子内过程导致的构象变化。紫外吸收和³¹P核磁共振表明,由主链扭曲产生的新构象与在低盐条件下观察到的构象(B型)不同。在高六核苷酸浓度下,会形成聚集体。第二个转变是协同的,对应于双链螺旋熔解为单链。

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引用本文的文献

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本文引用的文献

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Left-handed double helical DNA: variations in the backbone conformation.左手双螺旋DNA:主链构象的变化
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The B reversible Z transition of poly(dI-br5dC).poly(dI-br5dC). A quantitative description of the Z form dynamic structure.聚(dI-br5dC)·聚(dI-br5dC)的B可逆Z转变。Z型动态结构的定量描述。
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