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植物激素 6-苄基氨基嘌呤(6-BAP)刺激节旋藻脂质和 DHA 合成的转录组学机制

Transcriptomic Mechanism of the Phytohormone 6-Benzylaminopurine (6-BAP) Stimulating Lipid and DHA Synthesis in Aurantiochytrium sp.

机构信息

Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering , Zhejiang University of Technology , No. 18, Chaowang Road , Hangzhou 310014 , People's Republic of China.

Key Laboratory of Sustainable Development of Polar Fishery, Ministry of Agriculture and Rural Affairs , Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences , Qingdao 266071 , Shandong , People's Republic of China.

出版信息

J Agric Food Chem. 2019 May 15;67(19):5560-5570. doi: 10.1021/acs.jafc.8b07117. Epub 2019 Apr 2.

Abstract

The phytohormone 6-benzylaminopurine (6-BAP) significantly improves lipid synthesis of oleaginous microorganisms with the great potential applied in lipid production. In the current study, the lipid and DHA productions in oleaginous Aurantiochytrium sp. were found to be improved by 48.7% and 55.3%, respectively, induced by 6-BAP treatments. Then, using high-throughput RNA-seq technology, the overall de novo assembly of the cDNA sequence data generated 53871 unigenes, and 15902 of these were annotated in at least one database. The comparative transcriptomic profiles of cells with and without 6-BAP treatments revealed that a total of 717 were differently expressed genes (DE), with 472 upregulated and 245 downregulated. Further annotation and categorization indicated that some DE genes were involved in pathways crucial to lipid and DHA productions, such as fatty acid synthesis, central carbon metabolism, transcriptional factor, signal transduction, and mevalonate pathway. A regulation mode of 6-BAP, in turn, perception and transduction of 6-BAP signal, transcription factor, expression regulations of the downstream genes, and metabolic changes, respectively, was put forward for the first time in the present study. This research illuminates the transcriptomic mechanism of phytohormone stimulation of lipid and DHA production in an oleaginous microorganism and provides the potential targets modified using genetic engineering for improving lipid and DHA productivity.

摘要

植物激素 6-苄氨基嘌呤(6-BAP)显著提高了油脂微生物的脂质合成能力,具有在脂质生产中应用的巨大潜力。在本研究中,发现 6-BAP 处理分别将油脂型金藻的脂质和 DHA 产量提高了 48.7%和 55.3%。然后,利用高通量 RNA-seq 技术,对 cDNA 序列数据进行了从头组装,共获得了 53871 个 unigenes,其中 15902 个在至少一个数据库中得到了注释。有和没有 6-BAP 处理的细胞的比较转录组图谱显示,共有 717 个差异表达基因(DE),其中 472 个上调,245 个下调。进一步注释和分类表明,一些 DE 基因参与了脂质和 DHA 生产的关键途径,如脂肪酸合成、中心碳代谢、转录因子、信号转导和甲羟戊酸途径。本研究首次提出了 6-BAP 的调控模式,分别为 6-BAP 信号的感知和转导、转录因子、下游基因的表达调控和代谢变化。本研究阐明了植物激素刺激油脂微生物中脂质和 DHA 生产的转录组机制,并为利用遗传工程改良脂质和 DHA 生产力提供了潜在的目标。

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