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羊茅根际鞘微生物多样性与固氮酶活性的关系。

Relationship between microbial diversity and nitrogenase activity of Stipagrostis pennata rhizosheath.

机构信息

Xinjiang Key Laboratory of Special Species Conservation and Regulatory Biology, College of Life Science, Xinjiang Normal University, Urumqi, China.

Jiangsu Key Laboratory of Microbiology and Functional Genomics, College of Life Science, Nanjing Agricultural University, Nanjing, China.

出版信息

J Cell Biochem. 2019 Aug;120(8):13501-13508. doi: 10.1002/jcb.28625. Epub 2019 Apr 2.

Abstract

Nitrogen is the key factor for plant survival and growth, especially in the desert. Stipagrostis pennata, a sand born drought-resistant plant, could colonize pioneerly in Gurbantunggut Desert during revegetation. One strategy for their environment adaptation was the rhizosheath formatted by root-hair, mucilaginous exudates, microbial components, and soil particles, for which not only provides a favorable living microenvironment but also supplies essential nutrients. To understand the relationship between microorganisms living in rhizosheaths and the nitrogen nutrition supply, the microbial diversity and nitrogenase activity was estimated during the growth of S. pennata. Five samples of the rhizosheath, which based on the development periods of the plant, regreen, flowering, filling, seed maturating, and withering period, were collected. The nitrogenase activity was estimated by acetylene reduction and the microbial diversity was analyzed by 16S rRNA high-throughput sequencing. The results showed that the nitrogenase activity was increased slowly during regreen to flowering, while reached a peak rapidly at filling sample and then decreased gradually. A total of 274 operational taxonomic units (OTUs) were identified and significant differences in community structure and composition at each growth period. Among them, the main phyla included Actinobacteria and Proteus, which were the most abundant phyla in all periods. In addition, the microbial diversity in the grain filling period was higher than other periods in view of the analysis of alpha diversity and beta diversity. Furthermore, principal component analysis (PCA) analysis showed that the microbial communities in the filling period was low in similarity with other periods. Most importantly, the OTUs associated with nitrogen fixation is the most during the filling period, involving Phagecidae and Fucoraceae. Overall, the study not only revealed the differences in nitrogenase activity among different developmental periods in S. pennata, but also explored the potential bridges between it and community structure and diversity of bacteria.

摘要

氮是植物生存和生长的关键因素,特别是在沙漠中。沙生耐旱植物短柄拂子茅能够在古尔班通古特沙漠的植被恢复过程中进行先锋性定居。它们适应环境的一种策略是形成根鞘,由根毛、黏液渗出物、微生物成分和土壤颗粒组成,这不仅为微生物提供了有利的生存微环境,还提供了必需的养分。为了了解生活在根鞘中的微生物与氮素营养供应之间的关系,本研究在短柄拂子茅生长过程中估计了微生物多样性和固氮酶活性。根据植物的生长发育阶段,共采集了 5 个根鞘样本,分别为返青期、花期、灌浆期、种子成熟期和枯萎期。用乙炔还原法估计固氮酶活性,用 16S rRNA 高通量测序分析微生物多样性。结果表明,返青到花期固氮酶活性缓慢增加,而在灌浆期迅速达到峰值,然后逐渐下降。共鉴定出 274 个操作分类单元(OTUs),各生长阶段的群落结构和组成存在显著差异。其中,优势门包括放线菌门和变形菌门,它们在所有时期都是最丰富的门。此外,从α多样性和β多样性分析来看,灌浆期的微生物多样性高于其他时期。进一步的主成分分析(PCA)表明,灌浆期的微生物群落与其他时期的相似性较低。最重要的是,与固氮相关的 OTUs 在灌浆期最多,涉及噬菌科和红藻科。总的来说,本研究不仅揭示了短柄拂子茅不同发育阶段固氮酶活性的差异,还探讨了它与细菌群落结构和多样性之间的潜在联系。

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