Department of Genetics and Clinical Immunology, National Research Institute of Tuberculosis and Lung Diseases, 26 Plocka St., 01-138, Warsaw, Poland.
Department of Oncology, E.J. Zeyland Wielkopolska Center of Pulmonology and Thoracic Surgery, Poznan, Poland.
Cell Mol Life Sci. 2019 Sep;76(18):3641-3656. doi: 10.1007/s00018-019-03089-2. Epub 2019 Apr 5.
MicroRNAs (miRNAs), key regulators of gene expression at the post-transcriptional level, are grossly misregulated in some human cancers, including non-small-cell lung carcinoma (NSCLC). The aberrant expression of specific miRNAs results in the abnormal regulation of key components of signalling pathways in tumour cells. MiRNA levels and the activity of the gene targets, including oncogenes and tumour suppressors, produce feedback that changes miRNA expression levels and indicates the cell's genetic activity. In this study, we measured the expression of five circulating miRNAs (miR-195, miR-504, miR-122, miR-10b and miR-21) and evaluated their association with EPIDERMAL GROWTH FACTOR RECEPTOR (EGFR) mutation status in 66 NSCLC patients. Moreover, we examined the discriminative power of circulating miRNAs for EGFR mutant-positive and -negative NSCLC patients using two different data normalisation approaches. We extracted total RNA from the plasma of 66 non-squamous NSCLC patients (31 of whom had tumours with EGFR mutations) and measured circulating miRNA levels using quantitative reverse transcription polymerase chain reaction (RT-qPCR). The miRNA expression levels were normalised using two endogenous controls: miR-191 and miR-16. We found significant associations between the expression of circulating miR-504 and EGFR-activating mutations in NSCLC patients regardless of the normalisation approach used (p = 0.0072 and 0.0236 for miR-16 and miR-191 normalisation, respectively). The greatest discriminative power of circulating miR-504 was observed in patients with EGFR exon 19 deletions versus wild-type EGFR normalised to miR-191 (area under the curve (AUC) = 0.81, p < 0.0001). Interestingly, circulating miR-504 levels were significantly reduced in the v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (KRAS)-mutated subgroup compared to EGFR-mutated patients (p < 0.0030) and those with EGFR/KRAS wild-type tumours (p < 0.0359). Our study demonstrated the feasibility and potential diagnostic value of plasma miR-504 expression analysis to distinguish between EGFR-mutated and wild-type NSCLC patients. However, quality control and normalisation strategies are very important and have a major impact on the outcomes of circulating miRNA analyses.
微小 RNA(miRNAs)是在后转录水平上调控基因表达的关键因子,在一些人类癌症中存在明显失调,包括非小细胞肺癌(NSCLC)。特定 miRNAs 的异常表达导致肿瘤细胞中信号通路的关键成分异常调节。miRNA 水平和基因靶标的活性,包括癌基因和肿瘤抑制基因,产生反馈,改变 miRNA 表达水平,并指示细胞的遗传活性。在这项研究中,我们测量了 66 例 NSCLC 患者中五种循环 miRNA(miR-195、miR-504、miR-122、miR-10b 和 miR-21)的表达,并评估了它们与表皮生长因子受体(EGFR)突变状态的相关性。此外,我们使用两种不同的数据归一化方法,检查了循环 miRNA 对 EGFR 突变阳性和阴性 NSCLC 患者的区分能力。我们从 66 例非鳞状 NSCLC 患者的血浆中提取总 RNA(其中 31 例患者的肿瘤存在 EGFR 突变),并使用定量逆转录聚合酶链反应(RT-qPCR)测量循环 miRNA 水平。使用两种内源性对照物:miR-191 和 miR-16 对 miRNA 表达水平进行归一化。我们发现,无论使用何种归一化方法,循环 miR-504 的表达与 NSCLC 患者的 EGFR 激活突变之间均存在显著相关性(miR-16 和 miR-191 归一化时分别为 p=0.0072 和 0.0236)。在 EGFR 外显子 19 缺失与野生型 EGFR 相比,循环 miR-504 对 miR-191 的归一化具有最佳的区分能力(曲线下面积(AUC)=0.81,p<0.0001)。有趣的是,与 EGFR 突变患者(p<0.0030)和 EGFR/KRAS 野生型肿瘤患者(p<0.0359)相比,KRAS 突变亚组的循环 miR-504 水平显著降低。我们的研究表明,分析血浆 miR-504 表达来区分 EGFR 突变和野生型 NSCLC 患者具有可行性和潜在的诊断价值。然而,质量控制和归一化策略非常重要,对循环 miRNA 分析的结果有重大影响。