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使用 Ecomeristem 模拟分蘖生长和死亡作为汇驱动过程:对生物质高粱理想型的启示。

Modelling tiller growth and mortality as a sink-driven process using Ecomeristem: implications for biomass sorghum ideotyping.

机构信息

CIRAD, UMR AGAP, PAM, Montpellier, France.

UMR AGAP, Université Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France.

出版信息

Ann Bot. 2019 Oct 29;124(4):675-690. doi: 10.1093/aob/mcz038.

Abstract

BACKGROUND AND AIMS

Plant modelling can efficiently support ideotype conception, particularly in multi-criteria selection contexts. This is the case for biomass sorghum, implying the need to consider traits related to biomass production and quality. This study evaluated three modelling approaches for their ability to predict tiller growth, mortality and their impact, together with other morphological and physiological traits, on biomass sorghum ideotype prediction.

METHODS

Three Ecomeristem model versions were compared to evaluate whether tillering cessation and mortality were source (access to light) or sink (age-based hierarchical access to C supply) driven. They were tested using a field data set considering two biomass sorghum genotypes at two planting densities. An additional data set comparing eight genotypes was used to validate the best approach for its ability to predict the genotypic and environmental control of biomass production. A sensitivity analysis was performed to explore the impact of key genotypic parameters and define optimal parameter combinations depending on planting density and targeted production (sugar and fibre).

KEY RESULTS

The sink-driven control of tillering cessation and mortality was the most accurate, and represented the phenotypic variability of studied sorghum genotypes in terms of biomass production and partitioning between structural and non-structural carbohydrates. Model sensitivity analysis revealed that light conversion efficiency and stem diameter are key traits to target for improving sorghum biomass within existing genetic diversity. Tillering contribution to biomass production appeared highly genotype and environment dependent, making it a challenging trait for designing ideotypes.

CONCLUSIONS

By modelling tiller growth and mortality as sink-driven processes, Ecomeristem could predict and explore the genotypic and environmental variability of biomass sorghum production. Its application to larger sorghum genetic diversity considering water deficit regulations and its coupling to a genetic model will make it a powerful tool to assist ideotyping for current and future climatic scenario.

摘要

背景与目的

植物建模可以有效地支持理想型概念的构思,特别是在多标准选择的情况下。这对于生物量高粱来说尤其如此,因为这意味着需要考虑与生物量生产和质量有关的特性。本研究评估了三种建模方法,以评估它们预测分蘖生长、死亡率及其对生物量高粱理想型预测的影响的能力,以及其他形态和生理特性。

方法

比较了三种 Ecomeristem 模型版本,以评估分蘖停止和死亡率是源(对光的获取)还是汇(基于年龄的 C 供应分层获取)驱动。它们使用考虑两个生物量高粱基因型在两种种植密度的田间数据集进行了测试。使用比较 8 个基因型的附加数据集来验证最佳方法预测生物量生产的基因型和环境控制的能力。进行了敏感性分析,以探索关键基因型参数的影响,并根据种植密度和目标产量(糖和纤维)定义最佳参数组合。

主要结果

汇驱动的分蘖停止和死亡率控制是最准确的,它代表了研究高粱基因型在生物量生产和结构与非结构性碳水化合物之间分配方面的表型变异性。模型敏感性分析表明,光转换效率和茎直径是提高高粱生物量的关键性状,而高粱生物量在现有遗传多样性范围内。分蘖对生物量生产的贡献高度依赖于基因型和环境,这使得它成为设计理想型的一个具有挑战性的性状。

结论

通过将分蘖生长和死亡率建模为汇驱动过程,Ecomeristem 可以预测和探索生物量高粱生产的基因型和环境变异性。在考虑水分亏缺调节的情况下,将其应用于更大的高粱遗传多样性,并将其与遗传模型耦合,将使其成为协助当前和未来气候情景下理想型设计的有力工具。

相似文献

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Regulation of tillering in sorghum: genotypic effects.高粱分蘖调控:基因型效应。
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Correlation and path analysis of biomass sorghum production.生物质高粱产量的相关性与通径分析
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