Suppr超能文献

转录谱证实了 Mutant 可能在水稻( L.)过早叶片衰老中发挥作用。

Transcriptional Profile Corroborates that Mutant Plays likely Role in Premature Leaf Senescence of Rice ( L.).

机构信息

Department of Agronomy, Zhejiang University, Hangzhou 310027, China.

Department of Genetics and Plant Breeding, Sylhet Agricultural University, Sylhet 3100, Bangladesh.

出版信息

Int J Mol Sci. 2019 Apr 5;20(7):1708. doi: 10.3390/ijms20071708.

Abstract

Leaf senescence is the last period of leaf growth and a dynamic procedure associated with its death. The adaptability of the plants to changing environments occurs thanks to leaf senescence. Hence, transcriptional profiling is important to figure out the exact mechanisms of inducing leaf senescence in a particular crop, such as rice. From this perspective, leaf samples of two different rice genotypes, the () mutant and its wild type (WT) were sampled for transcriptional profiling to identify differentially-expressed genes (DEGs). We identified 2670 DEGs, among which 1657 genes were up- and 1013 genes were down-regulated. These DEGs were enriched in binding and catalytic activity, followed by the single organism process and metabolic process through gene ontology (GO), while the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis showed that the DEGs were related to the plant hormone signal transduction and photosynthetic pathway enrichment. The expression pattern and the clustering of DEGs revealed that the and family, as well as zinc finger transcription factors, had greater effects on early-senescence of leaf compared to other transcription factors. These findings will help to elucidate the precise functional role of rice mutant in the early-leaf senescence.

摘要

叶片衰老是叶片生长的最后阶段,是与叶片死亡相关的一个动态过程。植物对环境变化的适应性是通过叶片衰老来实现的。因此,对特定作物(如水稻)进行叶片衰老的转录组分析对于了解其确切机制非常重要。基于这一观点,我们对两个不同水稻基因型()突变体及其野生型(WT)的叶片样本进行了转录组分析,以鉴定差异表达基因(DEGs)。我们共鉴定到 2670 个 DEGs,其中 1657 个基因上调表达,1013 个基因下调表达。通过基因本体论(GO)注释,这些 DEGs 主要富集在结合和催化活性、单一生物体过程和代谢过程,京都基因与基因组百科全书(KEGG)通路分析表明,DEGs 与植物激素信号转导和光合作用途径富集有关。DEGs 的表达模式和聚类分析表明,与其他转录因子相比,WRKY 家族和锌指转录因子对叶片早期衰老的影响更大。这些发现将有助于阐明水稻突变体在叶片早期衰老中的精确功能作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc04/6480502/4a8346c598c7/ijms-20-01708-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验