Reproductive Medicine Center, Zhongshan Hospital, Fudan University, Shanghai, People's Republic of China.
Reproductive Medicine Center, Zhongshan Hospital, Fudan University, Shanghai, People's Republic of China.
Fertil Steril. 2019 Jun;111(6):1243-1251.e1. doi: 10.1016/j.fertnstert.2019.02.023. Epub 2019 Apr 9.
To determine aberrant circular RNA (circRNA) expression profiles in cumulus cells from polycystic ovarian syndrome (PCOS) patients and identify their potential biological functions.
Circular RNAs microarray analysis of human tissue.
University hospital.
PATIENT(S): A total of 40 women, including 20 PCOS patients and 20 non-PCOS patients.
INTERVENTION(S): None.
MAIN OUTCOME MEASURE(S): A circRNA microarray containing probes that interrogate 21,442 human circRNAs to investigate differentially expressed circRNAs in cumulus cells, with potential target genes of significantly changed circRNAs and biological functions measured by microRNA support vector regression (mirSVR) and gene ontology (GO) analysis, with Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis.
RESULT(S): A total of 1,032 circRNAs were identified that were differentially expressed in PCOS cumulus cells, including 311 circRNAs increase and 721 circRNAs decrease (fold change ≥2). Four aberrantly expressed circRNAs reached a statistically significant result after Bonferroni correction (with Bonferroni correction, only circRNAs for which P < .05/21,442 = 2.3 × 10 were considered statistically significant). Further analysis showed that aberrantly expressed circRNAs harbored microRNA binding sites, and some microRNAs were associated with PCOS. The GO and KEGG biological pathway analysis indicated that the genes with protein binding, mitotic nuclear envelope disassembly and metabolic pathways were statistically significantly enriched.
CONCLUSION(S): Our data suggest that the aberrantly expressed circRNAs and their targeted genes might be associated with PCOS, providing new clues to find key diagnostic and therapeutic molecular biomarkers for PCOS patients.
确定多囊卵巢综合征(PCOS)患者卵丘细胞中异常环状 RNA(circRNA)的表达谱,并鉴定其潜在的生物学功能。
人体组织的环状 RNA 微阵列分析。
大学医院。
共 40 名女性,包括 20 名 PCOS 患者和 20 名非 PCOS 患者。
无。
circRNA 微阵列包含 21442 个人类 circRNA 的探针,以研究卵丘细胞中差异表达的 circRNA,通过 microRNA 支持向量回归(mirSVR)和基因本体论(GO)分析测量显著变化的 circRNA 的潜在靶基因和生物学功能,京都基因与基因组百科全书(KEGG)途径分析。
共鉴定出 1032 个在 PCOS 卵丘细胞中差异表达的 circRNA,包括 311 个 circRNA 上调和 721 个 circRNA 下调(倍数变化≥2)。经过 Bonferroni 校正后,有 4 个异常表达的 circRNA 达到统计学显著结果(经 Bonferroni 校正后,只有 P <.05/21442 = 2.3×10 的 circRNA 被认为具有统计学意义)。进一步分析表明,异常表达的 circRNA 具有 microRNA 结合位点,一些 microRNA 与 PCOS 相关。GO 和 KEGG 生物途径分析表明,具有蛋白质结合、有丝分裂核膜解体和代谢途径的基因显著富集。
我们的数据表明,异常表达的 circRNA 及其靶向基因可能与 PCOS 有关,为寻找 PCOS 患者关键的诊断和治疗分子生物标志物提供了新的线索。