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KIAA0825 变异导致常染色体隐性后轴多指(趾)畸形。

Variants in KIAA0825 underlie autosomal recessive postaxial polydactyly.

机构信息

Department of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.

Institute of Human Genetics, University of Ulm, Ulm, Germany.

出版信息

Hum Genet. 2019 Jun;138(6):593-600. doi: 10.1007/s00439-019-02000-0. Epub 2019 Apr 13.

DOI:10.1007/s00439-019-02000-0
PMID:30982135
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6724712/
Abstract

Postaxial polydactyly (PAP) is a common limb malformation that often leads to cosmetic and functional complications. Molecular evaluation of polydactyly can serve as a tool to elucidate genetic and signaling pathways that regulate limb development, specifically, the anterior-posterior specification of the limb. To date, only five genes have been identified for nonsyndromic PAP: FAM92A, GLI1, GLI3, IQCE and ZNF141. In this study, two Pakistani multiplex consanguineous families with autosomal recessive nonsyndromic PAP were clinically and molecularly evaluated. From both pedigrees, a DNA sample from an affected member underwent exome sequencing. In each family, we identified a segregating frameshift (c.591dupA [p.(Q198Tfs21)]) and nonsense variant (c.2173A > T [p.(K725)]) in KIAA0825 (also known as C5orf36). Although KIAA0825 encodes a protein of unknown function, it has been demonstrated that its murine ortholog is expressed during limb development. Our data contribute to the establishment of a catalog of genes important in limb patterning, which can aid in diagnosis and obtaining a better understanding of the biology of polydactyly.

摘要

轴后多指(PAP)是一种常见的肢体畸形,常导致美容和功能并发症。多指的分子评估可作为阐明调节肢体发育的遗传和信号通路的工具,特别是肢体的前后规范。迄今为止,已鉴定出五个非综合征性 PAP 的基因:FAM92A、GLI1、GLI3、IQCE 和 ZNF141。在这项研究中,对来自两个巴基斯坦的常染色体隐性非综合征性 PAP 的多灶近亲家族进行了临床和分子评估。从两个家系中,受影响成员的 DNA 样本进行了外显子组测序。在每个家庭中,我们都鉴定出 KIAA0825(也称为 C5orf36)中存在一个可分离的移码突变(c.591dupA [p.(Q198Tfs21)]) 和无义突变(c.2173A > T [p.(K725)])。尽管 KIAA0825 编码一个未知功能的蛋白质,但已经证明其鼠类同源物在肢体发育过程中表达。我们的数据有助于建立一个在肢体模式形成中起重要作用的基因目录,这有助于诊断和更好地理解多指畸形的生物学。

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本文引用的文献

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GLI1 inactivation is associated with developmental phenotypes overlapping with Ellis-van Creveld syndrome.GLI1 失活与发育表型相关,与 Ellis-van Creveld 综合征重叠。
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Exome sequencing revealed a splice site variant in the IQCE gene underlying post-axial polydactyly type A restricted to lower limb.外显子组测序揭示了IQCE基因中的一个剪接位点变异,该变异是下肢局限型A轴后多指畸形的潜在病因。
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Exome sequencing and CRISPR/Cas genome editing identify mutations of ZAK as a cause of limb defects in humans and mice.外显子组测序和CRISPR/Cas基因组编辑确定ZAK突变是人类和小鼠肢体缺陷的一个原因。
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The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.国际小鼠表型分析联盟网站门户,是用于获取基因敲除小鼠及其相关表型数据的统一入口。
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Clinical and descriptive genetic study of polydactyly: a Pakistani experience of 313 cases.多指畸形的临床与描述性遗传学研究:巴基斯坦313例病例的经验
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Whole exome sequencing identified a novel zinc-finger gene ZNF141 associated with autosomal recessive postaxial polydactyly type A.全外显子测序鉴定出一个与常染色体隐性后轴多指畸形 A 型相关的新型锌指基因 ZNF141。
J Med Genet. 2013 Jan;50(1):47-53. doi: 10.1136/jmedgenet-2012-101219. Epub 2012 Nov 17.
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HomozygosityMapper2012--bridging the gap between homozygosity mapping and deep sequencing.2012 年 HomozygosityMapper——连接纯合子作图与深度测序之间的桥梁。
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