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使用几种“组学”方法是否有用,以获得有价值的结果?

Is it useful to use several "omics" for obtaining valuable results?

机构信息

Departament of Biochemistry, Faculty of Veterinary Medicine, University of Life Science in Lublin, Akademicka Street 12, 20-033, Lublin, Poland.

Institute of Plant Genetics, Breeding and Biotechnology, Faculty of Agrobioengineering, University of Life Sciences in Lublin, Akademicka Street 15, 20-950, Lublin, Poland.

出版信息

Mol Biol Rep. 2019 Jun;46(3):3597-3606. doi: 10.1007/s11033-019-04793-9. Epub 2019 Apr 15.

Abstract

The integration of cell communication and the transfer of signals from stimuli via transcription to translation and further to activation of new protein is crucial for appropriate metabolism and function of living organisms. The overall elucidation and the examination of these complex processes require multistep laboratory approaches in order to obtain results which will not only detect particular stage but also indicate the mechanisms lying upon this process. Such results will be reliable because they will cover multidirectional methods and approaches. The analysis of currently available results already provided with the conclusion that often single omics approach does not correspond with other expected information and may bring misinterpretations. That is why the integration of several "omics" is useful for searching entire explanations and answers as well as appropriate interpretation of obtained complex results. The hypothesis was stated that "from transcriptomics can not be concluded to proteomics". This review focuses on the reasons for the integration of transcriptomic, proteomic and other-omics analysis. Moreover it also describes the examples of clinical meanings and mentions some methods used in these approaches.

摘要

细胞通讯的整合以及刺激通过转录到翻译再到新蛋白质激活的信号传递,对于生物的适当代谢和功能至关重要。为了获得不仅能检测到特定阶段,还能表明该过程所依据的机制的结果,需要采用多步实验室方法来全面阐明和检查这些复杂过程。由于这些结果将涵盖多方向的方法和途径,因此是可靠的。对现有结果的分析已经得出结论,即单一的组学方法通常与其他预期信息不相符,并且可能会产生误解。这就是为什么整合几种“组学”方法对于寻找完整的解释和答案以及对获得的复杂结果进行适当的解释很有用。有人提出了“从转录组学不能推断出蛋白质组学”的假设。本文重点介绍了整合转录组学、蛋白质组学和其他组学分析的原因。此外,还描述了一些具有临床意义的例子,并提到了这些方法中使用的一些方法。

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