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卷曲螺旋结构力学的结构决定因素。

Structural determinants of coiled coil mechanics.

作者信息

López-García Patricia, Goktas Melis, Bergues-Pupo Ana E, Koksch Beate, Varón Silva Daniel, Blank Kerstin G

机构信息

Max Planck Institute of Colloids and Interfaces, Mechano(bio)chemistry, Science-Park Potsdam Golm, 14424 Potsdam, Germany.

出版信息

Phys Chem Chem Phys. 2019 May 8;21(18):9145-9149. doi: 10.1039/c9cp00665f.

Abstract

The natural abundance of coiled coil (CC) motifs in the cytoskeleton and the extracellular matrix suggests that CCs play a crucial role in the bidirectional mechanobiochemical signaling between cells and the matrix. Their functional importance and structural simplicity has allowed the development of numerous applications, such as protein-origami structures, drug delivery systems and biomaterials. With the goal of establishing CCs as nanomechanical building blocks, we investigated the importance of helix propensity and hydrophobic core packing on the mechanical stability of 4-heptad CC heterodimers. Using single-molecule force spectroscopy, we show that both parameters determine the force-induced dissociation in shear loading geometry; however, with different effects on the energy landscape. Decreasing the helix propensity lowers the transition barrier height, leading to a concomitant decrease in the distance to the transition state. In contrast, a less tightly packed hydrophobic core increases the distance to the transition state. We propose that this originates from a larger side chain dynamics, possible water intrusion at the interface as well as differences in solvation of the hydrophobic amino acids at the transition state. In conclusion, the different contributions of helix propensity and hydrophobic core packing need to be considered when tuning the mechanical properties of CCs for applications.

摘要

细胞骨架和细胞外基质中卷曲螺旋(CC)基序的自然丰度表明,CC在细胞与基质之间的双向机械生化信号传导中起着关键作用。它们的功能重要性和结构简单性使得众多应用得以发展,如蛋白质折纸结构、药物递送系统和生物材料。为了将CC确立为纳米机械构建块,我们研究了螺旋倾向性和疏水核心堆积对4-七肽CC异二聚体机械稳定性的重要性。使用单分子力谱,我们表明这两个参数决定了剪切加载几何形状中力诱导的解离;然而,对能量景观有不同影响。降低螺旋倾向性会降低过渡势垒高度,导致到过渡态的距离随之减小。相反,疏水性核心堆积不那么紧密会增加到过渡态的距离。我们认为这源于更大的侧链动力学、界面处可能的水侵入以及过渡态疏水氨基酸溶剂化的差异。总之,在为应用调整CC的机械性能时,需要考虑螺旋倾向性和疏水核心堆积的不同贡献。

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