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通过计算建模,在人工蛋白质中构建受激激子耦合二聚体以进行光捕获。

Engineering excitonically coupled dimers in an artificial protein for light harvesting via computational modeling.

机构信息

Institute of Chemical Research of Catalonia (ICIQ), Barcelona Institute of Science and Technology (BIST), Tarragona, Spain.

Laboratoire de Chimie, UMR 5182, ENS Lyon, CNRS, Université Lyon 1, Lyon, France.

出版信息

Protein Sci. 2023 Mar;32(3):e4579. doi: 10.1002/pro.4579.

Abstract

In photosynthesis, pigment-protein complexes achieve outstanding photoinduced charge separation efficiencies through a set of strategies in which excited states delocalization over multiple pigments ("excitons") and charge-transfer states play key roles. These concepts, and their implementation in bioinspired artificial systems, are attracting increasing attention due to the vast potential that could be tapped by realizing efficient photochemical reactions. In particular, de novo designed proteins provide a diverse structural toolbox that can be used to manipulate the geometric and electronic properties of bound chromophore molecules. However, achieving excitonic and charge-transfer states requires closely spaced chromophores, a non-trivial aspect since a strong binding with the protein matrix needs to be maintained. Here, we show how a general-purpose artificial protein can be optimized via molecular dynamics simulations to improve its binding capacity of a chlorophyll derivative, achieving complexes in which chromophores form two closely spaced and strongly interacting dimers. Based on spectroscopy results and computational modeling, we demonstrate each dimer is excitonically coupled, and propose they display signatures of charge-transfer state mixing. This work could open new avenues for the rational design of chromophore-protein complexes with advanced functionalities.

摘要

在光合作用中,色素-蛋白质复合物通过一系列策略实现了卓越的光诱导电荷分离效率,其中激发态在多个色素(“激子”)上离域以及电荷转移态起着关键作用。由于通过实现有效的光化学反应可以挖掘出巨大的潜力,这些概念及其在仿生人工系统中的应用引起了越来越多的关注。特别是,从头设计的蛋白质提供了一个多样化的结构工具箱,可用于操纵结合的生色团分子的几何和电子性质。然而,实现激子和电荷转移态需要紧密间隔的生色团,这是一个不小的挑战,因为需要与蛋白质基质保持强烈的结合。在这里,我们展示了如何通过分子动力学模拟优化通用人工蛋白质以提高其对叶绿素衍生物的结合能力,从而获得其中生色团形成两个紧密间隔且相互作用强烈的二聚体的复合物。基于光谱结果和计算模型,我们证明每个二聚体都是激子耦合的,并提出它们显示出电荷转移态混合的特征。这项工作可能为具有先进功能的色素-蛋白质复合物的合理设计开辟新途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c73/9951196/fad61b5d8a23/PRO-32-e4579-g003.jpg

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