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沿广泛海拔和环境梯度的土壤中古根霉菌的空间分布揭示了与其他真菌腐生菌的共丰度模式及潜在风化能力。

Archaeorhizomycetes Spatial Distribution in Soils Along Wide Elevational and Environmental Gradients Reveal Co-abundance Patterns With Other Fungal Saprobes and Potential Weathering Capacities.

作者信息

Pinto-Figueroa Eric Alejandro, Seddon Emily, Yashiro Erika, Buri Aline, Niculita-Hirzel Hélène, van der Meer Jan Roelof, Guisan Antoine

机构信息

Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.

Department of Fundamental Microbiology, University of Lausanne, Lausanne, Switzerland.

出版信息

Front Microbiol. 2019 Apr 4;10:656. doi: 10.3389/fmicb.2019.00656. eCollection 2019.

DOI:10.3389/fmicb.2019.00656
PMID:31019495
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6458284/
Abstract

Archaeorhizomycetes, a widespread fungal class with a dominant presence in many soil environments, contains cryptic filamentous species forming plant-root associations whose role in terrestrial ecosystems remains unclear. Here, we apply a correlative approach to identify the abiotic and biotic environmental variables shaping the distribution of this fungal group. We used a DNA sequencing dataset containing Archaeorhizomycetes sequences and environmental variables from 103 sites, obtained through a random-stratified sampling in the Western Swiss Alps along a wide elevation gradient (>2,500 m). We observed that the relative abundance of Archaeorhizomycetes follows a "humped-shaped" curve. Fitted linear and quadratic generalized linear models revealed that both climatic (minimum temperature, precipitation sum, growing degree-days) and edaphic (carbon, hydrogen, organic carbon, aluminum oxide, and phyllosilicates) factors contribute to explaining the variation in Archaeorhizomycetes abundance. Furthermore, a network inference topology described significant co-abundance patterns between Archaeorhizomycetes and other saprotrophic and ectomycorrhizal fungal taxa. Overall, our results provide strong support to the hypothesis that Archaeorhizomycetes in this area have clear ecological requirements along wide, elevation-driven abiotic and biotic gradients. Additionally, correlations to soil redox parameters, particularly with phyllosilicates minerals, suggest Archaeorhizomycetes might be implied in biological rock weathering. Such soil taxa-environment studies along wide gradients are thus a useful complement to latitudinal field observations and culture-based approaches to uncover the ecological roles of cryptic soil organisms.

摘要

古根菌纲是一类广泛分布的真菌,在许多土壤环境中占主导地位,其中包含一些形成植物根系关联的隐秘丝状物种,其在陆地生态系统中的作用尚不清楚。在这里,我们采用一种关联方法来确定影响该真菌类群分布的非生物和生物环境变量。我们使用了一个DNA测序数据集,其中包含古根菌纲序列和来自103个位点的环境变量,这些数据是通过在瑞士西部阿尔卑斯山沿广泛海拔梯度(>2500米)进行随机分层采样获得的。我们观察到古根菌纲的相对丰度呈“驼峰状”曲线。拟合的线性和二次广义线性模型表明,气候因素(最低温度、降水总和、生长度日)和土壤因素(碳、氢、有机碳、氧化铝和层状硅酸盐)都有助于解释古根菌纲丰度的变化。此外,网络推断拓扑结构描述了古根菌纲与其他腐生和外生菌根真菌类群之间显著的共丰度模式。总体而言,我们的结果为以下假设提供了有力支持:该地区的古根菌纲在广泛的、由海拔驱动的非生物和生物梯度上具有明确的生态需求。此外,与土壤氧化还原参数的相关性,特别是与层状硅酸盐矿物的相关性,表明古根菌纲可能参与生物岩石风化。因此,这种沿广泛梯度的土壤类群-环境研究是对纬度实地观察和基于培养的方法的有益补充,有助于揭示隐秘土壤生物的生态作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/eb5e2f8db99b/fmicb-10-00656-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/8df698fcf3e7/fmicb-10-00656-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/98d710327311/fmicb-10-00656-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/5867f765e1a6/fmicb-10-00656-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/eb5e2f8db99b/fmicb-10-00656-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/8df698fcf3e7/fmicb-10-00656-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/98d710327311/fmicb-10-00656-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/5867f765e1a6/fmicb-10-00656-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa92/6458284/eb5e2f8db99b/fmicb-10-00656-g004.jpg

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