Chen Wen-Ming, Xie Yi-Ru, Kwon Soon-Wo, Sheu Shih-Yi
1Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung University of Science and Technology, Kaohsiung City 811, PR China.
2Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju-gun, Jeollabuk-do 55365, Republic of Korea.
Int J Syst Evol Microbiol. 2019 Jun;69(6):1705-1713. doi: 10.1099/ijsem.0.003382. Epub 2019 Apr 29.
A bacterial strain, BBQ-12, was isolated from a freshwater lake in Taiwan. The strain was Gram-stain-negative, strictly aerobic, motile by gliding, rod-shaped and formed yellow colonies. Optimal growth occurred at 25 °C, pH 6 and in the absence of NaCl. Phylogenetic analyses based on 16S rRNA gene sequences and coding sequences of 92 protein clusters indicated that strain BBQ-12 formed a phylogenetic lineage in the genus Flavobacterium. Strain BBQ-12 was most closely related to Flavobacterium fluminis 3R17 with 98.1 % 16S rRNA gene sequence similarity. Strain BBQ-12 showed 74.4-83.1 % average nucleotide identity and 16.0-21.8 % digital DNA-DNA hybridization identity with the type strains of other closely related Flavobacterium species. Strain BBQ-12 contained iso-C15 : 0, summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c) and anteiso-C15 : 0 as the predominant fatty acids. The polar lipid profile consisted of phosphatidylethanolamine, four uncharacterized aminophospholipids and three uncharacterized phospholipids. The major polyamine was homospermidine. The major isoprenoid quinone was MK-6. The DNA G+C content of the genomic DNA was 34.2 mol%. Differential phenotypic properties, together with the phylogenetic inference, demonstrate that strain BBQ-12 should be classified as a novel species of the genus Flavobacterium, for which the name Flavobacteriumsufflavum sp. nov. is proposed. The type strain is BBQ-12 (=BCRC 81049=LMG 30051=KCTC 52809).
从台湾的一个淡水湖分离出一株细菌,编号为BBQ-12。该菌株革兰氏染色阴性,严格需氧,靠滑行运动,呈杆状,形成黄色菌落。最适生长温度为25 °C,pH值为6,且无氯化钠存在。基于16S rRNA基因序列和92个蛋白质簇的编码序列进行的系统发育分析表明,菌株BBQ-12在黄杆菌属中形成了一个系统发育谱系。菌株BBQ-12与河流黄杆菌3R17关系最为密切,16S rRNA基因序列相似度为98.1%。菌株BBQ-12与其他密切相关的黄杆菌属模式菌株的平均核苷酸同一性为74.4-83.1%,数字DNA-DNA杂交同一性为16.0-21.8%。菌株BBQ-12以异-C15 : 0、总和特征3(C16 : 1ω6c和/或C16 : 1ω7c)和anteiso-C15 : 0作为主要脂肪酸。极性脂质谱由磷脂酰乙醇胺、四种未鉴定的氨基磷脂和三种未鉴定的磷脂组成。主要的多胺是高亚精胺。主要的类异戊二烯醌是MK-6。基因组DNA的G+C含量为34.2摩尔%。不同的表型特征以及系统发育推断表明,菌株BBQ-12应被归类为黄杆菌属的一个新物种,为此提出新名称黄褐黄杆菌(Flavobacteriumsufflavum sp. nov.)。模式菌株为BBQ-12(=BCRC 81049=LMG 30051=KCTC 52809)。