Shirakawa Makoto, Uehara Iwao, Tanaka Megumi
Graduate School of Agriculture, Tokyo University of Agriculture.
Faculty of Regional Environment Sci., Tokyo University of Agriculture.
Microbes Environ. 2019 Jun 27;34(2):191-198. doi: 10.1264/jsme2.ME18146. Epub 2019 May 11.
We investigated whether ectomycorrhizal (ECM) fungal species exhibit antibacterial activity towards culturable bacterial communities in mycorrhizospheres. Four hundred and thirty bacterial strains were isolated from the ECM root tips of Pinus densiflora and bulk soil, and 21 were co-cultured with six ECM fungal species. Three hundred and twenty-nine bacterial 16S rDNA sequences were identified in ECM roots (n=185) and bulk soil (n=144). Mycorrhizosphere isolates were dominated by Gram-negative Proteobacteria from 16 genera, including Burkholderia, Collimonas, Paraburkholderia, and Rhizobium. Paraburkholderia accounted for approximately 60%. In contrast, bulk soil isolates contained a high number of Gram-positive Firmicutes, particularly from Bacillus. Paraburkholderia accounted for ≤20% of the bacterial isolates from bulk soil, which was significantly lower than its percentage in ECM root tips. Co-cultures of six ECM fungal species with the 21 bacterial strains revealed that eight strains of three Gram-positive genera-Arthrobacter, Bacillus, and Lysinibacillus-were sensitive to the antibacterial activity of the fungi. In contrast, the Gram-negative strains, including five Paraburkholderia strains, two Burkholderia strains, and a Rhizobium sp., were not sensitive. The strength of fungal antibacterial activity varied in a species-dependent manner, but consistently affected Gram-positive bacteria. These results suggest that Gram-positive bacteria are excluded from the mycorrhizosphere by the antibacterial activity of ECM fungi, which develops specific soil bacterial communities in the mycorrhizosphere.
我们研究了外生菌根(ECM)真菌物种对菌根际可培养细菌群落是否具有抗菌活性。从赤松的ECM根尖和大量土壤中分离出430株细菌菌株,并将其中21株与6种ECM真菌物种进行共培养。在ECM根(n = 185)和大量土壤(n = 144)中鉴定出329个细菌16S rDNA序列。菌根际分离物以来自16个属的革兰氏阴性变形菌为主,包括伯克霍尔德氏菌属、鞘氨醇单胞菌属、副伯克霍尔德氏菌属和根瘤菌属。副伯克霍尔德氏菌约占60%。相比之下,大量土壤分离物中含有大量革兰氏阳性厚壁菌,尤其是芽孢杆菌属。副伯克霍尔德氏菌在大量土壤细菌分离物中占比≤20%,显著低于其在ECM根尖中的百分比。6种ECM真菌物种与21株细菌菌株的共培养结果表明,革兰氏阳性菌的3个属——节杆菌属、芽孢杆菌属和赖氨酸芽孢杆菌属的8个菌株对真菌的抗菌活性敏感。相比之下,革兰氏阴性菌株,包括5株副伯克霍尔德氏菌菌株、2株伯克霍尔德氏菌菌株和1株根瘤菌属菌株,不敏感。真菌抗菌活性的强度因物种而异,但始终对革兰氏阳性菌有影响。这些结果表明,革兰氏阳性菌通过ECM真菌的抗菌活性被排除在菌根际之外,这在菌根际形成了特定的土壤细菌群落。