Department of Surgery, Seoul National University Hospital Healthcare System Gangnam Center, Seoul, Korea.
DNA Link, Inc., Seoul, Korea.
Sci Rep. 2019 May 14;9(1):7360. doi: 10.1038/s41598-019-43692-8.
Diverticulosis results from complex interactions related to aging, environmental factors and genetic predisposition. Despite epidemiologic evidence of genetic risk factors, there has been no attempt to identify genes that confer susceptibility to colonic diverticulosis. We performed the first genome-wide association study (GWAS) on susceptibility to diverticulosis in a Korean population. A GWAS was carried out in 7,948 healthy individuals: 893 patients and 1,075 controls comprised the test set, and 346 patients and 305 controls comprised the replication set. Diverticulosis was diagnosed by colonoscopy during comprehensive medical check-ups, and single-nucleotide polymorphisms (SNPs) related to diverticulosis were detected with the Affymetrix Axiom KORV1.1-96 Array. In all, 9 SNPs were identified in three SNP aggregates in the test set (P < 10, within 200 kb) after adjusting for sex. All the SNPs were replicated in the replication set (P < 0.05). Three SNPs were near the WNT4 gene, four near the RHOU gene, and two in the OAS1/3 genes. The top SNP associated with right-sided colonic diverticulosis was rs22538787, located near the WNT4 gene [combined set, P-value = 3.128 × 10, odds ratio = 1.415 (95% confidence interval: 1.223-1.637)]. These 9 novel SNP alleles associated with the WNT4, RHOU, and OAS1/3 genes are possibly involved in the underlying genetic susceptibility to right-sided diverticulosis. Our results provide basic knowledge about the development of diverticulosis in an Asian population.
憩室病是由与衰老、环境因素和遗传易感性相关的复杂相互作用引起的。尽管有流行病学证据表明存在遗传危险因素,但尚未尝试鉴定出易患结肠憩室病的基因。我们在韩国人群中进行了首次针对憩室病易感性的全基因组关联研究(GWAS)。在 7948 名健康个体中进行了 GWAS:893 名患者和 1075 名对照组成了测试集,346 名患者和 305 名对照组成了复制集。通过全面体检时的结肠镜检查诊断憩室病,并用 Affymetrix Axiom KORV1.1-96 Array 检测与憩室病相关的单核苷酸多态性(SNP)。在调整了性别后,在测试集中的三个 SNP 聚集物中总共发现了 9 个 SNP(P<10,在 200kb 以内)。所有 SNP 在复制集中均得到了复制(P<0.05)。三个 SNP 位于 WNT4 基因附近,四个 SNP 位于 RHOU 基因附近,两个 SNP 位于 OAS1/3 基因附近。与右侧结肠憩室病相关的最高 SNP 是 rs22538787,位于 WNT4 基因附近[综合集,P 值=3.128×10-8,优势比=1.415(95%置信区间:1.223-1.637)]。这 9 个与 WNT4、RHOU 和 OAS1/3 基因相关的新 SNP 等位基因可能与右侧憩室病的潜在遗传易感性有关。我们的研究结果为亚洲人群中憩室病的发展提供了基本知识。