• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单细胞方法研究细胞竞争:高通量成像、机器学习和模拟。

Single-cell approaches to cell competition: High-throughput imaging, machine learning and simulations.

机构信息

Department of Physics and Astronomy, University College London, Gower Street, London, WC1E 6BT, UK; London Centre for Nanotechnology, University College London, 17-19 Gordon Street, London, WC1H 0AH, UK.

London Centre for Nanotechnology, University College London, 17-19 Gordon Street, London, WC1H 0AH, UK; Department of Cell and Developmental Biology, University College London, Gower Street, London, WC1E 6BT, UK.

出版信息

Semin Cancer Biol. 2020 Jun;63:60-68. doi: 10.1016/j.semcancer.2019.05.007. Epub 2019 May 18.

DOI:10.1016/j.semcancer.2019.05.007
PMID:31108201
Abstract

Cell competition is a quality control mechanism in tissues that results in the elimination of less fit cells. Over the past decade, the phenomenon of cell competition has been identified in many physiological and pathological contexts, driven either by biochemical signaling or by mechanical forces within the tissue. In both cases, competition has generally been characterized based on the elimination of loser cells at the population level, but significantly less attention has been focused on determining how single-cell dynamics and interactions regulate population-wide changes. In this review, we describe quantitative strategies and outline the outstanding challenges in understanding the single cell rules governing tissue-scale competition dynamics. We propose quantitative metrics to characterize single cell behaviors in competition and use them to distinguish the types and outcomes of competition. We describe how such metrics can be measured experimentally using a novel combination of high-throughput imaging and machine learning algorithms. We outline the experimental challenges to quantify cell fate dynamics with high-statistical precision, and describe the utility of computational modeling in testing hypotheses not easily accessible in experiments. In particular, cell-based modeling approaches that combine mechanical interaction of cells with decision-making rules for cell fate choices provide a powerful framework to understand and reverse-engineer the diverse rules of cell competition.

摘要

细胞竞争是组织中的一种质量控制机制,导致适应能力较低的细胞被消除。在过去的十年中,细胞竞争现象在许多生理和病理情况下都得到了确认,其驱动力要么是生化信号,要么是组织内的机械力。在这两种情况下,竞争通常是基于群体水平上淘汰失败者细胞来进行描述的,但对于如何确定单细胞动力学和相互作用如何调节整体种群变化,关注明显较少。在这篇综述中,我们描述了定量策略,并概述了理解控制组织规模竞争动力学的单细胞规则的突出挑战。我们提出了定量指标来描述竞争中的单细胞行为,并利用它们来区分竞争的类型和结果。我们描述了如何使用高通量成像和机器学习算法的新组合来从实验上测量这些指标。我们概述了量化具有高统计精度的细胞命运动力学的实验挑战,并描述了计算建模在测试实验中不易获得的假设方面的效用。特别是,将细胞间机械相互作用与细胞命运选择的决策规则相结合的基于细胞的建模方法,为理解和反向设计细胞竞争的多种规则提供了一个强大的框架。

相似文献

1
Single-cell approaches to cell competition: High-throughput imaging, machine learning and simulations.单细胞方法研究细胞竞争:高通量成像、机器学习和模拟。
Semin Cancer Biol. 2020 Jun;63:60-68. doi: 10.1016/j.semcancer.2019.05.007. Epub 2019 May 18.
2
Modeling and measurement of signaling outcomes affecting decision making in noisy intracellular networks using machine learning methods.使用机器学习方法对影响噪声细胞内网络决策的信号转导结果进行建模和测量。
Integr Biol (Camb). 2020 May 21;12(5):122-138. doi: 10.1093/intbio/zyaa009.
3
Cell competition in tumor evolution and heterogeneity: Merging past and present.肿瘤进化和异质性中的细胞竞争:融合过去和现在。
Semin Cancer Biol. 2020 Jun;63:11-18. doi: 10.1016/j.semcancer.2019.07.008. Epub 2019 Jul 16.
4
Modeling of spatially-restricted intracellular signaling.空间限制的细胞内信号建模。
Wiley Interdiscip Rev Syst Biol Med. 2012 Jan-Feb;4(1):103-15. doi: 10.1002/wsbm.155. Epub 2011 Jul 15.
5
Cell-scale biophysical determinants of cell competition in epithelia.上皮细胞中细胞竞争的细胞尺度生物物理决定因素。
Elife. 2021 May 20;10:e61011. doi: 10.7554/eLife.61011.
6
Data-driven modeling and prediction of blood glucose dynamics: Machine learning applications in type 1 diabetes.基于数据驱动的血糖动力学建模与预测:机器学习在 1 型糖尿病中的应用。
Artif Intell Med. 2019 Jul;98:109-134. doi: 10.1016/j.artmed.2019.07.007. Epub 2019 Jul 26.
7
From observing to predicting single-cell structure and function with high-throughput/high-content microscopy.利用高通量/高内涵显微镜从观察到预测单细胞结构和功能。
Essays Biochem. 2019 Jul 3;63(2):197-208. doi: 10.1042/EBC20180044.
8
Solid stress, competition for space and cancer: The opposing roles of mechanical cell competition in tumour initiation and growth.固体应力、空间竞争和癌症:机械细胞竞争在肿瘤起始和生长中的相反作用。
Semin Cancer Biol. 2020 Jun;63:69-80. doi: 10.1016/j.semcancer.2019.05.004. Epub 2019 May 8.
9
Reflections on cell competition.关于细胞竞争的思考
Semin Cell Dev Biol. 2014 Aug;32:137-44. doi: 10.1016/j.semcdb.2014.04.034. Epub 2014 May 5.
10
Data-Driven and Machine Learning-Based Framework for Image-Guided Single-Cell Mass Spectrometry.基于数据驱动和机器学习的图像引导单细胞质谱分析框架。
J Proteome Res. 2023 Feb 3;22(2):491-500. doi: 10.1021/acs.jproteome.2c00714. Epub 2023 Jan 25.

引用本文的文献

1
Live-cell analyses with unsegmented images to study cancer cell response to modified T cell therapy.使用未分割图像进行活细胞分析,以研究癌细胞对改良T细胞疗法的反应。
bioRxiv. 2025 Jun 7:2025.06.04.657687. doi: 10.1101/2025.06.04.657687.
2
Machine learning and single-cell analysis uncover distinctive characteristics of CD300LG within the TNBC immune microenvironment: experimental validation.机器学习与单细胞分析揭示三阴性乳腺癌免疫微环境中CD300LG的独特特征:实验验证
Clin Exp Med. 2025 May 17;25(1):167. doi: 10.1007/s10238-025-01690-3.
3
Spatial and temporal signatures of cell competition revealed by K-function analysis.
通过K函数分析揭示的细胞竞争的时空特征
Mol Biol Cell. 2025 May 1;36(5):ar61. doi: 10.1091/mbc.E24-10-0481. Epub 2025 Mar 26.
4
Single-cell spatial metabolomics with cell-type specific protein profiling for tissue systems biology.基于细胞类型特异性蛋白分析的单细胞空间代谢组学用于组织系统生物学。
Nat Commun. 2023 Dec 13;14(1):8260. doi: 10.1038/s41467-023-43917-5.
5
The PECAn image and statistical analysis pipeline identifies Minute cell competition genes and features.PECAn 图像和统计分析流程可识别 Minute 细胞竞争基因和特征。
Nat Commun. 2023 May 10;14(1):2686. doi: 10.1038/s41467-023-38287-x.
6
Single Cell Biology: Exploring Somatic Cell Behaviors, Competition and Selection in Chronic Disease.单细胞生物学:探索慢性病中的体细胞行为、竞争与选择
Front Pharmacol. 2022 May 17;13:867431. doi: 10.3389/fphar.2022.867431. eCollection 2022.
7
Cell-scale biophysical determinants of cell competition in epithelia.上皮细胞中细胞竞争的细胞尺度生物物理决定因素。
Elife. 2021 May 20;10:e61011. doi: 10.7554/eLife.61011.