Quantitative Sciences- Department of Bioinformatics & Biostatistics, H. Lee. Moffitt Cancer Center, Tampa, FL, USA.
Department of Radiology, H. Lee. Moffitt Cancer Center, Tampa, FL, USA.
Sci Rep. 2019 Jun 12;9(1):8528. doi: 10.1038/s41598-019-44562-z.
Pulmonary nodules are frequently detected radiological abnormalities in lung cancer screening. Nodules of the highest- and lowest-risk for cancer are often easily diagnosed by a trained radiologist there is still a high rate of indeterminate pulmonary nodules (IPN) of unknown risk. Here, we test the hypothesis that computer extracted quantitative features ("radiomics") can provide improved risk-assessment in the diagnostic setting. Nodules were segmented in 3D and 219 quantitative features are extracted from these volumes. Using these features novel malignancy risk predictors are formed with various stratifications based on size, shape and texture feature categories. We used images and data from the National Lung Screening Trial (NLST), curated a subset of 479 participants (244 for training and 235 for testing) that included incident lung cancers and nodule-positive controls. After removing redundant and non-reproducible features, optimal linear classifiers with area under the receiver operator characteristics (AUROC) curves were used with an exhaustive search approach to find a discriminant set of image features, which were validated in an independent test dataset. We identified several strong predictive models, using size and shape features the highest AUROC was 0.80. Using non-size based features the highest AUROC was 0.85. Combining features from all the categories, the highest AUROC were 0.83.
肺结节是肺癌筛查中经常发现的影像学异常。高风险和低风险的结节通常很容易被训练有素的放射科医生诊断,但仍有很高比例的不确定肺结节(IPN),其风险未知。在这里,我们检验了一个假设,即计算机提取的定量特征(“放射组学”)可以在诊断环境中提供更好的风险评估。结节在 3D 中进行分割,并从这些体积中提取 219 个定量特征。使用这些特征,根据大小、形状和纹理特征类别进行各种分层,形成新的恶性肿瘤风险预测因子。我们使用来自国家肺癌筛查试验(NLST)的图像和数据,对包括偶发性肺癌和结节阳性对照组在内的 479 名参与者(244 名用于训练,235 名用于测试)进行了亚组分析。在去除冗余和不可再现的特征后,使用具有接收器操作特征(AUROC)曲线的最优线性分类器,采用穷尽搜索方法寻找具有判别力的图像特征集,并在独立测试数据集进行验证。我们确定了几个预测能力较强的模型,使用大小和形状特征的 AUROC 最高为 0.80。使用非基于大小的特征,AUROC 最高为 0.85。结合所有类别的特征,AUROC 最高为 0.83。