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专有的多基因风险算法:保护科学创新还是掩盖其不足?

Proprietary Algorithms for Polygenic Risk: Protecting Scientific Innovation or Hiding the Lack of It?

机构信息

Department of Epidemiology, Rollins School of Public Health, Emory University, 1518 Clifton Road NE, Atlanta, GA 30322, USA.

出版信息

Genes (Basel). 2019 Jun 13;10(6):448. doi: 10.3390/genes10060448.

Abstract

Direct-to-consumer genetic testing companies aim to predict the risks of complex diseases using proprietary algorithms. Companies keep algorithms as trade secrets for competitive advantage, but a market that thrives on the premise that customers can make their own decisions about genetic testing should respect customer autonomy and informed decision making and maximize opportunities for transparency. The algorithm itself is only one piece of the information that is deemed essential for understanding how prediction algorithms are developed and evaluated. Companies should be encouraged to disclose everything else, including the expected risk distribution of the algorithm when applied in the population, using a benchmark DNA dataset. A standardized presentation of information and risk distributions allows customers to compare test offers and scientists to verify whether the undisclosed algorithms could be valid. A new model of oversight in which stakeholders collaboratively keep a check on the commercial market is needed.

摘要

直接面向消费者的基因检测公司旨在使用专有的算法来预测复杂疾病的风险。公司将算法作为商业秘密保留,以获得竞争优势,但这个市场的繁荣前提是客户可以自主决定是否进行基因检测,因此应该尊重客户自主权和知情决策,并最大限度地提高透明度机会。算法本身只是被认为对于理解预测算法的开发和评估至关重要的信息的一部分。应该鼓励公司披露其他所有信息,包括在人群中应用算法时的预期风险分布,使用基准 DNA 数据集。信息和风险分布的标准化呈现可以让客户比较测试产品,科学家也可以验证未公开的算法是否有效。需要建立一个新的监管模式,让利益相关者共同监督商业市场。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2152/6627729/67729ec185ff/genes-10-00448-g001.jpg

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