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本文引用的文献

1
Culturing the ubiquitous freshwater actinobacterial acI lineage by supplying a biochemical 'helper' catalase.通过提供生化“辅助”过氧化氢酶来培养无处不在的淡水放线菌 acI 谱系。
ISME J. 2019 Sep;13(9):2252-2263. doi: 10.1038/s41396-019-0432-x. Epub 2019 May 9.
2
A human gut bacterial genome and culture collection for improved metagenomic analyses.人类肠道细菌基因组和培养物集合,用于改进宏基因组分析。
Nat Biotechnol. 2019 Feb;37(2):186-192. doi: 10.1038/s41587-018-0009-7. Epub 2019 Feb 4.
3
Phylogenetically Novel Uncultured Microbial Cells Dominate Earth Microbiomes.系统发育上全新的未培养微生物细胞主导着地球微生物群落。
mSystems. 2018 Sep 25;3(5). doi: 10.1128/mSystems.00055-18. eCollection 2018 Sep-Oct.
4
Elucidation of glutamine lipid biosynthesis in marine bacteria reveals its importance under phosphorus deplete growth in Rhodobacteraceae.阐明海洋细菌中的谷氨酰胺脂质生物合成,揭示了其在红杆菌科磷匮乏生长条件下的重要性。
ISME J. 2019 Jan;13(1):39-49. doi: 10.1038/s41396-018-0249-z. Epub 2018 Aug 14.
5
Mutant phenotypes for thousands of bacterial genes of unknown function.数千个功能未知的细菌基因的突变表型。
Nature. 2018 May;557(7706):503-509. doi: 10.1038/s41586-018-0124-0. Epub 2018 May 16.
6
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly.动态根系分泌物化学与微生物底物偏好驱动根际微生物群落组装模式。
Nat Microbiol. 2018 Apr;3(4):470-480. doi: 10.1038/s41564-018-0129-3. Epub 2018 Mar 19.
7
Linking soil biology and chemistry in biological soil crust using isolate exometabolomics.利用分离的胞外代谢组学将生物土壤结皮中的土壤生物学与化学联系起来。
Nat Commun. 2018 Jan 2;9(1):19. doi: 10.1038/s41467-017-02356-9.
8
Root microbiota drive direct integration of phosphate stress and immunity.根系微生物群驱动磷胁迫与免疫的直接整合。
Nature. 2017 Mar 23;543(7646):513-518. doi: 10.1038/nature21417. Epub 2017 Mar 15.
9
SAR11 Bacteria: The Most Abundant Plankton in the Oceans.SAR11 细菌:海洋中最丰富的浮游生物。
Ann Rev Mar Sci. 2017 Jan 3;9:231-255. doi: 10.1146/annurev-marine-010814-015934. Epub 2016 Sep 28.
10
The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota.小鼠肠道细菌集(miBC)为研究肠道微生物群的培养多样性和功能潜力提供了宿主特异性的见解。
Nat Microbiol. 2016 Aug 8;1(10):16131. doi: 10.1038/nmicrobiol.2016.131.

一场“文化”复兴:基因组学为一门古老技艺注入新活力。

A "Cultural" Renaissance: Genomics Breathes New Life into an Old Craft.

作者信息

Carini Paul

机构信息

Department of Soil, Water and Environmental Science, University of Arizona, Tucson, Arizona, USA

出版信息

mSystems. 2019 May 7;4(3):e00092-19. doi: 10.1128/mSystems.00092-19.

DOI:10.1128/mSystems.00092-19
PMID:31219785
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6533372/
Abstract

Sometimes, to move ahead, you must take a look at where you have been. Culturing microbes is a foundational underpinning of microbiology. Before genome sequencing, researchers spent countless hours tediously deducing the nutritional requirements of bacterial isolates and tinkering with medium formulations to entice new microbes into culture. This art of cultivation took a back seat to the powerful molecular tools of the last 25 years, and as a result, many researchers have forgotten the utility of having a culture in hand. This perception is changing, as there is clearly a renewed interest in isolating microbes from various environments. Here, I suggest three focus areas to ensure continued growth and success of this "cultural" renaissance, including (i) setting clear cultivation goals, (ii) funding exploratory cultivation, and (iii) culturing and studying unusual organisms. "Unculturable" is a frame of mind, not a state of microbiology; it is time to dust off the bottle of yeast extract.

摘要

有时,要向前迈进,你必须审视自己的来路。培养微生物是微生物学的一项基础支撑。在基因组测序之前,研究人员花费无数时间,乏味地推导细菌分离株的营养需求,并反复调整培养基配方,以诱使新的微生物生长。在过去25年里,这种培养技术让位于强大的分子工具,结果,许多研究人员忘记了拥有一份培养物的实用价值。这种观念正在改变,因为显然人们对从各种环境中分离微生物重新产生了兴趣。在此,我提出三个重点领域,以确保这种“培养”复兴持续发展并取得成功,包括(i)设定明确的培养目标,(ii)资助探索性培养,以及(iii)培养和研究不寻常的生物体。“不可培养”是一种思维定式,而非微生物学的一种状态;是时候掸去酵母提取物瓶子上的灰尘了。