Department of Obstetrics and Gynecology, The Second People's Hospital of Hefei, Anhui Medical University Affiliated Hefei Hospital, Hefei, 230011, Anhui, China.
Mamm Genome. 2019 Aug;30(7-8):217-225. doi: 10.1007/s00335-019-09808-1. Epub 2019 Jun 20.
Gene deletion or gene amplification acts as a driving factor of onset, progress, and metastasis in various cancers, including ovarian cancers. By mining the whole genome data of ovarian cancer patients, we identify the long noncoding RNA PVT1 as the most amplified gene. Knockdown of PVT1 was then achieved using a shRNA in two ovarian cancer cell lines, and cell viability was determined by trypan blue exclusion assay, cell metabolism by 3-(4,5-dimethyl-2-thiazolyl)-2,5-diphenyl-2-H-tetrazolium bromide assay, and cell cycle alteration by propidium iodide cell cycle analysis. Potential targeting microRNAs were predicted with starBase v2.0, and direct binding of miR-140 on PVT1 was confirmed by luciferase reporter assay and microRNA pull-down assay. Evolutionary conserved transcription factor-binding site was predicted via rVista 2.0. Our results show that PVT1 was the most amplified gene in ovarian cancer patients, and it was highly correlated with poor survival outcomes. Knockdown of PVT1 caused decreased cell viability, metabolic activity, and smaller proportion of S-phase cells. PVT1 directly bound to miR-140 and acted as a microRNA sponge, while transcription of PVT1 was regulated by the transcription factor FOXO4. In conclusion, viability, metabolism, and cell cycle of ovarian cancers are regulated by the FOXO4/PVT1/miR-140 signaling pathway.
基因缺失或基因扩增是各种癌症(包括卵巢癌)发生、进展和转移的驱动因素。通过对卵巢癌患者的全基因组数据进行挖掘,我们确定了长非编码 RNA PVT1 是扩增最明显的基因。在两种卵巢癌细胞系中,使用 shRNA 敲低 PVT1,通过台盼蓝排斥试验测定细胞活力,通过 3-(4,5-二甲基-2-噻唑基)-2,5-二苯基-2-H-四唑溴盐试验测定细胞代谢,通过碘化丙啶细胞周期分析测定细胞周期改变。通过 starBase v2.0 预测潜在的靶向 microRNAs,并通过荧光素酶报告试验和 microRNA 下拉试验证实 miR-140 与 PVT1 的直接结合。通过 rVista 2.0 预测进化保守的转录因子结合位点。我们的结果表明,PVT1 是卵巢癌患者中扩增最明显的基因,它与不良生存结局高度相关。敲低 PVT1 导致细胞活力、代谢活性降低,S 期细胞比例减小。PVT1 直接与 miR-140 结合,充当 microRNA 海绵,而 PVT1 的转录受转录因子 FOXO4 调控。总之,FOXO4/PVT1/miR-140 信号通路调节卵巢癌的活力、代谢和细胞周期。