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前瞻性运动校正在功能磁共振成像中使用同时多切片成像和多切片到体积图像配准。

Prospective motion correction in functional MRI using simultaneous multislice imaging and multislice-to-volume image registration.

机构信息

Fraunhofer Institute for Digital Medicine MEVIS, Bremen, Germany.

Fraunhofer Institute for Digital Medicine MEVIS, Bremen, Germany; University of Bremen, Bremen, Germany.

出版信息

Neuroimage. 2019 Oct 15;200:159-173. doi: 10.1016/j.neuroimage.2019.06.042. Epub 2019 Jun 19.

Abstract

The sensitivity to subject motion is one of the major challenges in functional MRI (fMRI) studies in which a precise alignment of images from different time points is required to allow reliable quantification of brain activation throughout the scan. Especially the long measurement times and laborious fMRI tasks add to the amount of subject motion found in typical fMRI measurements, even when head restraints are used. In case of moving subjects, prospective motion correction can maintain the relationship between spatial image information and subject anatomy by constantly adapting the image slice positioning to follow the subject in real time. Image-based prospective motion correction is well-established in fMRI studies and typically computes the motion estimates based on a volume-to-volume image registration, resulting in low temporal resolution. This study combines fMRI using simultaneous multislice imaging with multislice-to-volume-based image registration to allow sub-TR motion detection with subsequent real-time adaption of the imaging system. Simultaneous multislice imaging is widely used in fMRI studies and, together with multislice-to-volume-based image registration algorithms, enables computing suitable motion states after only a single readout by registering the simultaneously excited slices to a reference volume acquired at the start of the measurement. The technique is evaluated in three human BOLD fMRI studies (n = 1, 5, and 1) to explore different aspects of the method. It is compared to conventional, volume-to-volume-based prospective motion correction as well as retrospective motion correction methods. Results show a strong reduction in retrospectively computed residual motion parameters of up to 50% when comparing the two prospective motion correction techniques. An analysis of temporal signal-to-noise ratio as well as brain activation results shows high consistency between the results before and after additional retrospective motion correction when using the proposed technique, indicating successful prospective motion correction. The comparison of absolute tSNR values does not show an improvement compared to using retrospective motion correction alone. However, the improved temporal resolution may provide improved tSNR in the presence of more exaggerated intra-volume motion.

摘要

对受试者运动的敏感性是功能磁共振成像(fMRI)研究中的主要挑战之一,在这些研究中,需要对来自不同时间点的图像进行精确对准,以允许在整个扫描过程中可靠地量化大脑激活。特别是当使用头架时,即使使用头架,长时间的测量时间和繁琐的 fMRI 任务也会增加典型 fMRI 测量中发现的受试者运动的数量。在运动受试者的情况下,前瞻性运动校正可以通过不断地将图像切片位置调整到实时跟随受试者来保持空间图像信息与受试者解剖结构之间的关系。基于图像的前瞻性运动校正已在 fMRI 研究中得到广泛应用,通常基于体素到体素的图像配准来计算运动估计,从而导致时间分辨率较低。本研究将同时使用多切片成像的 fMRI 与基于多切片到体素的图像配准相结合,以允许亚 TR 运动检测,并随后实时适应成像系统。同时使用多切片成像在 fMRI 研究中得到了广泛应用,并且与基于多切片到体素的图像配准算法相结合,通过将同时激发的切片配准到在测量开始时获得的参考体积,可以在仅单个读出后计算出合适的运动状态。该技术在三个人类 BOLD fMRI 研究(n=1、5 和 1)中进行了评估,以探索该方法的不同方面。将其与传统的基于体素的前瞻性运动校正以及回顾性运动校正方法进行了比较。结果表明,当比较两种前瞻性运动校正技术时,通过回顾性计算的残留运动参数可减少高达 50%。对时间信号到噪声比以及大脑激活结果的分析表明,在使用所提出的技术进行额外的回顾性运动校正后,结果具有很高的一致性,表明成功地进行了前瞻性运动校正。与单独使用回顾性运动校正相比,绝对 tSNR 值的比较并未显示出改善。但是,在存在更夸张的体积内运动的情况下,改进的时间分辨率可能会提供更高的 tSNR。

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