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从DNA分子钟推断人类在人猿总科中的位置。

Man's place in Hominoidea as inferred from molecular clocks of DNA.

作者信息

Hasegawa M, Kishino H, Yano T

机构信息

Institute of Statistical Mathematics, Tokyo, Japan.

出版信息

J Mol Evol. 1987;26(1-2):132-47. doi: 10.1007/BF02111287.

Abstract

Divergence dates among primates were estimated by molecular clock analysis of DNA sequence data. A molecular clock of eta-globin pseudogene was calibrated by setting the date of divergence between Catarrhini and Platyrrhini at 38 million years (Myr) ago. The clock gave dates of 25.3 +/- 2.4, 11.9 +/- 1.7, 5.9 +/- 1.2, and 4.9 +/- 1.2 Myr ago ( +/- refers to standard error) for the separation of rhesus monkey, orangutan, gorilla, and chimpanzee, respectively, from the line leading to humans. In placing confidence intervals of the estimates in a robust way, a bootstrap method was used. The 95% confidence intervals are 20.5-29.5, 9.0-14.8, 4.1-7.8, and 3.1-7.0 Myr ago for the separation of rhesus monkey, orangutan, gorilla, and chimpanzee, respectively. By a molecular clock dating of the Prosimii-Anthropoidea splitting, it was suggested that the evolutionary rate of the eta-globin gene was high early in primate evolution and subsequently decreased in the line of Anthropoidea. And, by a relative rate test using bootstrap sampling, the possibility of further decrease of the rate (more than 10%) in the line of Hominoidea compared with that of Cercopithecoidea was suggested. Therefore, the above dating of the splittings within Hominoidea may be biased slightly toward younger dates. On the other hand, mitochondrial DNA (mtDNA) seems to have evolved in mammals with a more uniform rate than the eta-globin gene. The ratio of the dates of orangutan splitting to chimpanzee splitting is larger for the mtDNA clock than that for the eta-globin clock, suggesting the possibilities of mtDNA introgression among the early hominids and the early African apes, and/or of mtDNA polymorphism within the common ancestral species of orangutan and the African apes that obscures the date of the true species separation of orangutans.

摘要

通过对DNA序列数据进行分子钟分析来估计灵长类动物之间的分歧时间。通过将狭鼻猴类和阔鼻猴类之间的分歧时间设定在3800万年前,对η-珠蛋白假基因的分子钟进行了校准。该分子钟给出了恒河猴、猩猩、大猩猩和黑猩猩分别从通向人类的谱系中分离出来的时间为25.3±2.4、11.9±1.7、5.9±1.2和4.9±1.2百万年前(±表示标准误差)。为了以稳健的方式确定估计值的置信区间,使用了自举法。恒河猴、猩猩、大猩猩和黑猩猩分离的95%置信区间分别为20.5 - 29.5、9.0 - 14.8、4.1 - 7.8和3.1 - 7.0百万年前。通过对原猴亚目 - 类人猿亚目分裂的分子钟定年,表明η-珠蛋白基因的进化速率在灵长类进化早期较高,随后在类人猿谱系中下降。并且,通过使用自举抽样的相对速率测试,表明与猕猴科相比,人猿总科谱系中速率进一步下降(超过10%)的可能性。因此,上述人猿总科内部分裂的定年可能会稍微偏向更年轻的时间。另一方面,线粒体DNA(mtDNA)在哺乳动物中的进化速率似乎比η-珠蛋白基因更均匀。mtDNA钟的猩猩分裂时间与黑猩猩分裂时间的比值大于η-珠蛋白钟,这表明早期原始人类和早期非洲猿之间存在mtDNA渐渗的可能性,和/或猩猩与非洲猿的共同祖先物种内存在mtDNA多态性,从而模糊了猩猩真正物种分离的时间。

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