School of Life Science, Sichuan University, Animal Disease Prevention and Food Safety Key Laboratory of Sichuan Province, "985 Project" Science Innovative Platform for Resource and Environment Protection of Southwestern, Key Laboratory of Bio-resources and Eco-environment, Ministry of Education,29# Wangjiang Road, Chengdu 610065, China.
Poult Sci. 2019 Nov 1;98(11):5401-5411. doi: 10.3382/ps/pez372.
Infectious bronchitis virus (IBV) and Newcastle disease virus (NDV) are both important viruses seriously affecting poultry industry worldwide. In this study, reverse-transcription LAMP (RT-LAMP) was combined with lateral flow dipstick (LFD) forming a novel detection tool which could simultaneously detect IBV and NDV visually. Primers targeted the 5'-untranslated region (5'-UTR) of IBV genome and the conserved region of NDV large polymerase gene (LP). The specificity and sensitivity of this multiple reverse transcription-LAMP-LFD (mRT-LAMP-LFD) assay were compared with those of conventional RT-PCR, nested RT-PCR (nRT-PCR), quantification RT-PCR (qRT-PCR), and RT-LAMP monitored by electrophoresis. No non-specific amplifications were observed when the assays were tested with unrelated viruses. According to the sensitivity study, when detecting IBV or NDV alone, the lowest detection limits of mRT-LAMP-LFD were 100.8 IBV RNA copies/reaction and 100.7 NDV RNA copies/reaction. Furthermore, when detecting IBV and NDV simultaneously, the lowest detection limit was the same as that of the single detection assays. In the clinical sample study, mRT-LAMP-LFD performed the best among these assays. When tested with IBV or NDV single infected samples, the mean detection rates were 98.65% and 97.25%, respectively. In the IBV and NDV co-infected sample study, the mean detection rates of IBV and NDV were both 95%. This study showed that mRT-LAMP-LFD was a promising qualitative detection tool suitable for field single or multiple IBV and NDV detection.
传染性支气管炎病毒(IBV)和新城疫病毒(NDV)都是严重影响全球家禽业的重要病毒。在本研究中,逆转录环介导等温扩增(RT-LAMP)与侧向流动试纸条(LFD)相结合,形成了一种能够同时直观检测 IBV 和 NDV 的新型检测工具。引物针对 IBV 基因组的 5'-非翻译区(5'-UTR)和 NDV 大聚合酶基因(LP)的保守区。该多重逆转录-LAMP-LFD(mRT-LAMP-LFD)检测方法的特异性和灵敏度与常规 RT-PCR、巢式 RT-PCR(nRT-PCR)、定量 RT-PCR(qRT-PCR)和电泳监测的 RT-LAMP 进行了比较。当用无关病毒进行检测时,没有观察到非特异性扩增。根据灵敏度研究,当单独检测 IBV 或 NDV 时,mRT-LAMP-LFD 的最低检测限分别为 100.8 IBV RNA 拷贝/反应和 100.7 NDV RNA 拷贝/反应。此外,当同时检测 IBV 和 NDV 时,最低检测限与单检测分析相同。在临床样本研究中,mRT-LAMP-LFD 在这些分析中表现最好。当用 IBV 或 NDV 单一感染样本进行测试时,平均检测率分别为 98.65%和 97.25%。在 IBV 和 NDV 混合感染样本研究中,IBV 和 NDV 的平均检测率均为 95%。本研究表明,mRT-LAMP-LFD 是一种有前途的定性检测工具,适用于现场单一或多种 IBV 和 NDV 的检测。