Dao Oanh, Asaithambi Killivalavan, Na Byeong Kuk, Lee Kon Ho
Department of Convergence Medical Science, Gyeongsang National University College of Medicine, Jinju, Gyeongsangnam, Republic of Korea.
Acta Crystallogr F Struct Biol Commun. 2019 Jul 1;75(Pt 7):480-488. doi: 10.1107/S2053230X19008112. Epub 2019 Jun 26.
The iron superoxide dismutase found in the pathogenic amoeba Acanthamoeba castellanii (AcFeSOD) may play essential roles in the survival of the parasite, not only by protecting it from endogenous oxidative stress but also by detoxifying oxidative killing of the parasite by host immune effector cells. The AcFeSOD protein was expressed in a stable form using an Escherichia coli expression system and was crystallized by the microbatch and hanging-drop vapour-diffusion methods. The structure was determined to 2.33 Å resolution from a single AcFeSOD crystal. The crystal belonged to the hexagonal space group P6 and contained 12 molecules forming three tetramers in the asymmetric unit, with an iron ion bound in each molecule. Structural comparisons and sequence alignment of AcFeSOD with other FeSODs showed a well conserved overall fold and conserved active-site residues with subtle differences.
在致病性变形虫卡氏棘阿米巴(AcFeSOD)中发现的铁超氧化物歧化酶可能在该寄生虫的生存中发挥重要作用,这不仅是通过保护其免受内源性氧化应激,还通过使宿主免疫效应细胞对寄生虫的氧化杀伤解毒来实现。使用大肠杆菌表达系统以稳定形式表达AcFeSOD蛋白,并通过微量分批和悬滴气相扩散法使其结晶。从单个AcFeSOD晶体确定该结构的分辨率为2.33 Å。该晶体属于六方空间群P6,在不对称单元中包含12个分子,形成三个四聚体,每个分子中结合有一个铁离子。AcFeSOD与其他FeSOD的结构比较和序列比对显示,总体折叠结构保守,活性位点残基保守,但存在细微差异。