Suppr超能文献

致病变形虫卡氏棘阿米巴铁超氧化物歧化酶的晶体结构

Crystal structure of an iron superoxide dismutase from the pathogenic amoeba Acanthamoeba castellanii.

作者信息

Dao Oanh, Asaithambi Killivalavan, Na Byeong Kuk, Lee Kon Ho

机构信息

Department of Convergence Medical Science, Gyeongsang National University College of Medicine, Jinju, Gyeongsangnam, Republic of Korea.

出版信息

Acta Crystallogr F Struct Biol Commun. 2019 Jul 1;75(Pt 7):480-488. doi: 10.1107/S2053230X19008112. Epub 2019 Jun 26.

Abstract

The iron superoxide dismutase found in the pathogenic amoeba Acanthamoeba castellanii (AcFeSOD) may play essential roles in the survival of the parasite, not only by protecting it from endogenous oxidative stress but also by detoxifying oxidative killing of the parasite by host immune effector cells. The AcFeSOD protein was expressed in a stable form using an Escherichia coli expression system and was crystallized by the microbatch and hanging-drop vapour-diffusion methods. The structure was determined to 2.33 Å resolution from a single AcFeSOD crystal. The crystal belonged to the hexagonal space group P6 and contained 12 molecules forming three tetramers in the asymmetric unit, with an iron ion bound in each molecule. Structural comparisons and sequence alignment of AcFeSOD with other FeSODs showed a well conserved overall fold and conserved active-site residues with subtle differences.

摘要

在致病性变形虫卡氏棘阿米巴(AcFeSOD)中发现的铁超氧化物歧化酶可能在该寄生虫的生存中发挥重要作用,这不仅是通过保护其免受内源性氧化应激,还通过使宿主免疫效应细胞对寄生虫的氧化杀伤解毒来实现。使用大肠杆菌表达系统以稳定形式表达AcFeSOD蛋白,并通过微量分批和悬滴气相扩散法使其结晶。从单个AcFeSOD晶体确定该结构的分辨率为2.33 Å。该晶体属于六方空间群P6,在不对称单元中包含12个分子,形成三个四聚体,每个分子中结合有一个铁离子。AcFeSOD与其他FeSOD的结构比较和序列比对显示,总体折叠结构保守,活性位点残基保守,但存在细微差异。

相似文献

1
Crystal structure of an iron superoxide dismutase from the pathogenic amoeba Acanthamoeba castellanii.致病变形虫卡氏棘阿米巴铁超氧化物歧化酶的晶体结构
Acta Crystallogr F Struct Biol Commun. 2019 Jul 1;75(Pt 7):480-488. doi: 10.1107/S2053230X19008112. Epub 2019 Jun 26.
4
Preliminary crystallographic analysis of the Megavirus superoxide dismutase.巨型病毒超氧化物歧化酶的初步晶体学分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Dec 1;68(Pt 12):1557-9. doi: 10.1107/S174430911204657X. Epub 2012 Nov 28.
7
A type-1 metacaspase from Acanthamoeba castellanii.来自卡氏棘阿米巴的1型 metacaspase。
Microbiol Res. 2008;163(4):414-23. doi: 10.1016/j.micres.2006.06.017. Epub 2006 Aug 4.

引用本文的文献

本文引用的文献

5
Dali server update.大理服务器更新。
Nucleic Acids Res. 2016 Jul 8;44(W1):W351-5. doi: 10.1093/nar/gkw357. Epub 2016 Apr 29.
6
Superoxide Ion: Generation and Chemical Implications.超氧离子:生成及其化学意义
Chem Rev. 2016 Mar 9;116(5):3029-85. doi: 10.1021/acs.chemrev.5b00407. Epub 2016 Feb 15.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验