CIC bioGUNE , Bizkaia Technology Park, Building 800 , 48160 Derio , Bizkaia , Spain.
School of Chemistry , University of Southampton Highfield , Southampton SO17 1BJ , United Kingdom.
ACS Chem Biol. 2019 Jul 19;14(7):1660-1671. doi: 10.1021/acschembio.9b00458. Epub 2019 Jul 8.
The dendritic cell-specific intracellular adhesion molecule-3-grabbing nonintegrin (DC-SIGN) is an important receptor of the immune system. Besides its role as pathogen recognition receptor (PRR), it also interacts with endogenous glycoproteins through the specific recognition of self-glycan epitopes, like Le. However, this lectin represents a paradigmatic case of glycan binding promiscuity, and it also has been shown to recognize antigens with α1-α2 linked fucose, such as the histo blood group antigens, with similar affinities to Le. Herein, we have studied the interaction in solution between DC-SIGN and the blood group A and B antigens, to get insights into the atomic details of such interaction. With a combination of different NMR experiments, we demonstrate that the Fuc coordinates the primary Ca ion with a single binding mode through 3-OH and 4-OH. The terminal αGal/αGalNAc affords marginal direct polar contacts with the protein, but provides a hydrophobic hook in which V351 of the lectin perfectly fits. Moreover, we have found that αGal, but not αGalNAc, is a weak binder itself for DC-SIGN, which could endow an additional binding mode for the blood group B antigen, but not for blood group A.
树突状细胞特异性细胞间黏附分子-3 捕获非整合素(DC-SIGN)是免疫系统的重要受体。除了作为病原体识别受体(PRR)的作用外,它还通过对自身糖表位的特异性识别与内源性糖蛋白相互作用,如 Le。然而,这种凝集素代表了糖结合混杂性的典型例子,并且已经表明它也可以识别具有α1-α2 连接岩藻糖的抗原,例如组织血型抗原,与 Le 的亲和力相似。在此,我们研究了 DC-SIGN 与血型 A 和 B 抗原在溶液中的相互作用,以深入了解这种相互作用的原子细节。通过一系列不同的 NMR 实验,我们证明 Fuc 通过 3-OH 和 4-OH 以单一结合模式与主 Ca 离子配位。末端αGal/αGalNAc 与蛋白质提供了少量的直接极性接触,但提供了一个疏水钩,其中凝集素的 V351 完美契合。此外,我们发现αGal 本身虽然不是αGalNAc,是 DC-SIGN 的弱结合物,这可以为血型 B 抗原提供额外的结合模式,但不能为血型 A 抗原提供。