Marik Tamás, Tyagi Chetna, Balázs Dóra, Urbán Péter, Szepesi Ágnes, Bakacsy László, Endre Gábor, Rakk Dávid, Szekeres András, Andersson Maria A, Salonen Heidi, Druzhinina Irina S, Vágvölgyi Csaba, Kredics László
Department of Microbiology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary.
Department of General and Environmental Microbiology, Faculty of Sciences, and Szentágothai Research Center, University of Pécs, Pécs, Hungary.
Front Microbiol. 2019 Jun 26;10:1434. doi: 10.3389/fmicb.2019.01434. eCollection 2019.
This study examined the structural diversity and bioactivity of peptaibol compounds produced by species from the phylogenetically separated Longibrachiatum Clade of the filamentous fungal genus , which contains several biotechnologically, agriculturally and clinically important species. HPLC-ESI-MS investigations of crude extracts from 17 species of the Longibrachiatum Clade (. , and ) revealed several new and recurrent 20-residue peptaibols related to trichobrachins, paracelsins, suzukacillins, saturnisporins, trichoaureocins, trichocellins, longibrachins, hyporientalins, trichokonins, trilongins, metanicins, trichosporins, gliodeliquescins, alamethicins and hypophellins, as well as eight 19-residue sequences from a new subfamily of peptaibols named brevicelsins. Non-ribosomal peptide synthetase genes were mined from the available genome sequences of the Longibrachiatum Clade. Their annotation and product prediction were performed and revealed full agreement in 11 out of 20 positions regarding the amino acids predicted based on the signature sequences and the detected amino acids incorporated. Molecular dynamics simulations were performed for structural characterization of four selected peptaibol sequences: paracelsins B, H and their 19-residue counterparts brevicelsins I and IV. Loss of position R6 in brevicelsins resulted in smaller helical structures with higher atomic fluctuation for every residue than the structures formed by paracelsins. We observed the formation of highly bent, almost hairpin-like, helical structures throughout the trajectory, along with linear conformation. Bioactivity tests were performed on the purified peptaibol extract of . on clinically and phytopathologically important filamentous fungi, mammalian cells, and seedlings. Porcine kidney cells and boar spermatozoa proved to be sensitive to the purified peptaibol extract. Peptaibol concentrations ≥0.3 mg ml deterred the growth of . . However, negative effects to plants were not detected at concentrations below 0.1 mg ml, which could still inhibit plant pathogenic filamentous fungi, suggesting that those peptaibols reported here may have applications for plant protection.
本研究考察了丝状真菌属中系统发育上分离的长枝组物种产生的肽菌素化合物的结构多样性和生物活性,该组包含多个在生物技术、农业和临床方面具有重要意义的物种。对长枝组17个物种(包括、和)的粗提物进行的高效液相色谱 - 电喷雾电离质谱(HPLC - ESI - MS)研究揭示了几种新的和常见的20个残基的肽菌素,它们与枝状菌素、帕拉塞尔菌素、铃木杀菌素、土星孢菌素、金色枝状菌素、枝状纤维素、长枝菌素、下东方菌素、枝状康宁素、三长菌素、变构菌素、枝状孢子菌素、胶质消解菌素、丙甲菌素和下菲菌素有关,以及来自一个名为短枝菌素的肽菌素新亚家族的8个19个残基的序列。从长枝组可用的基因组序列中挖掘非核糖体肽合成酶基因。对其进行注释和产物预测,结果显示基于特征序列预测的氨基酸与检测到的掺入氨基酸在20个位置中的11个位置上完全一致。对四个选定的肽菌素序列进行分子动力学模拟以进行结构表征:帕拉塞尔菌素B、H及其19个残基的对应物短枝菌素I和IV。短枝菌素中R6位置的缺失导致形成的螺旋结构比帕拉塞尔菌素形成的结构更小,每个残基的原子波动更高。在整个轨迹中,我们观察到形成了高度弯曲的、几乎呈发夹状的螺旋结构以及线性构象。对的纯化肽菌素提取物进行了生物活性测试,测试对象为临床和植物病理学上重要的丝状真菌、哺乳动物细胞以及幼苗。猪肾细胞和公猪精子对纯化的肽菌素提取物敏感。肽菌素浓度≥0.3 mg/ml可抑制的生长。然而,在浓度低于0.1 mg/ml时未检测到对植物的负面影响,该浓度仍可抑制植物病原丝状真菌,这表明本文报道的那些肽菌素可能具有植物保护应用价值。