• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

能够降解咔唑的海洋进化枝成员sp.菌株S3的全基因组序列

Complete Genome Sequence of sp. Strain S3, a Marine Clade Member Capable of Degrading Carbazole.

作者信息

Vejarano Felipe, Suzuki-Minakuchi Chiho, Ohtsubo Yoshiyuki, Tsuda Masataka, Okada Kazunori, Nojiri Hideaki

机构信息

Biotechnology Research Center, The University of Tokyo, Tokyo, Japan.

Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo, Japan.

出版信息

Microbiol Resour Announc. 2019 Jul 11;8(28):e00231-19. doi: 10.1128/MRA.00231-19.

DOI:10.1128/MRA.00231-19
PMID:31296670
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6624753/
Abstract

We determined the complete genome sequence of sp. strain S3, a marine carbazole degrader isolated from Tokyo Bay in Japan that carries genes for aerobic anoxygenic phototrophy. Strain S3 has a 4.7-Mb chromosome that harbors the carbazole-degradative gene cluster and three (96-, 63-, and 46-kb) plasmids.

摘要

我们测定了sp.菌株S3的全基因组序列，该菌株是从日本东京湾分离出的一种海洋咔唑降解菌，携带有氧不产氧光合作用基因。菌株S3有一条4.7兆碱基的染色体，其中含有咔唑降解基因簇和三个质粒（96千碱基、63千碱基和46千碱基）。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a22/6624753/6be93c8dc9bc/MRA.00231-19-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a22/6624753/6be93c8dc9bc/MRA.00231-19-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a22/6624753/6be93c8dc9bc/MRA.00231-19-f0001.jpg

相似文献

1
Complete Genome Sequence of sp. Strain S3, a Marine Clade Member Capable of Degrading Carbazole.能够降解咔唑的海洋进化枝成员sp.菌株S3的全基因组序列
Microbiol Resour Announc. 2019 Jul 11;8(28):e00231-19. doi: 10.1128/MRA.00231-19.
2
Complete Genome Sequence of the Marine Carbazole-Degrading Bacterium Erythrobacter sp. Strain KY5.海洋咔唑降解细菌红杆菌属菌株KY5的全基因组序列
Microbiol Resour Announc. 2018 Aug 30;7(8). doi: 10.1128/MRA.00935-18. eCollection 2018 Aug.
3
Genome sequence of strain HTCC2083, a novel member of the marine clade Roseobacter.海洋分支玫瑰杆菌新成员 HTCC2083 菌株的基因组序列。
J Bacteriol. 2011 Jan;193(1):319-20. doi: 10.1128/JB.01268-10. Epub 2010 Oct 29.
4
Thalassococcus halodurans gen. nov., sp. nov., a novel halotolerant member of the Roseobacter clade isolated from the marine sponge Halichondria panicea at Friday Harbor, USA.嗜盐海球菌属，新属，新种，从美国星期五港的海洋海绵Panicea halichondria分离出的玫瑰杆菌科的一种新型耐盐成员。
Int J Syst Evol Microbiol. 2007 Aug;57(Pt 8):1919-1924. doi: 10.1099/ijs.0.64801-0.
5
Draft Genome Sequence of the Aerobic Anoxygenic Phototrophic Bacterium sp. Strain OBYS 0001, Isolated from Coastal Seawater in Otsuchi Bay, Japan.从日本大槌湾沿海海水中分离出的需氧不产氧光合细菌sp.菌株OBYS 0001的基因组序列草图
Microbiol Resour Announc. 2021 Jul 15;10(28):e0048821. doi: 10.1128/MRA.00488-21.
6
The Sphingomonas plasmid pCAR3 is involved in complete mineralization of carbazole.鞘氨醇单胞菌质粒pCAR3参与咔唑的完全矿化。
J Bacteriol. 2007 Mar;189(5):2007-20. doi: 10.1128/JB.01486-06. Epub 2006 Dec 15.
7
Think pink: photosynthesis, plasmids and the Roseobacter clade.想想粉色：光合作用、质粒和玫瑰杆菌群。
Environ Microbiol. 2012 Oct;14(10):2661-72. doi: 10.1111/j.1462-2920.2012.02806.x. Epub 2012 Jun 26.
8
Genome Sequence of Jannaschia aquimarina GSW-M26, a Member of the Roseobacter Clade.玫瑰杆菌纲成员海洋詹氏菌GSW-M26的基因组序列
Genome Announc. 2015 Apr 23;3(2):e00353-15. doi: 10.1128/genomeA.00353-15.
9
Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales.嗜碱海杆菌属新属，新种，一种已进行基因组测序的红杆菌目红杆菌科海洋细菌。
Int J Syst Evol Microbiol. 2007 Jul;57(Pt 7):1653-1658. doi: 10.1099/ijs.0.64960-0.
10
Characterization and genetic analyses of a carbazole-degrading gram-positive marine isolate, Janibacter sp. strain OC11.一株咔唑降解革兰氏阳性海洋分离菌詹氏菌属菌株OC11的特性及遗传分析
Biosci Biotechnol Biochem. 2014;78(6):1094-101. doi: 10.1080/09168451.2014.917260. Epub 2014 May 28.

引用本文的文献

1
Diversity of marine bacteria growing on leachates from virgin and weathered plastic: Insights into potential degraders.海洋细菌在原生和风化塑料浸出液上的生长多样性：对潜在降解菌的洞察。
Environ Microbiol Rep. 2024 Jun;16(3):e13305. doi: 10.1111/1758-2229.13305.
2
The potential application of carbazole-degrading bacteria for dioxin bioremediation.咔唑降解菌在二噁英生物修复中的潜在应用。
Bioresour Bioprocess. 2023 Aug 30;10(1):56. doi: 10.1186/s40643-023-00680-1.
3
Draft Genome Sequence of the Marine-Derived, Anticancer Compound-Producing Bacterium sp. Strain GMY01.

本文引用的文献

1
Complete Genome Sequence of the Marine Carbazole-Degrading Bacterium Erythrobacter sp. Strain KY5.海洋咔唑降解细菌红杆菌属菌株KY5的全基因组序列
Microbiol Resour Announc. 2018 Aug 30;7(8). doi: 10.1128/MRA.00935-18. eCollection 2018 Aug.
2
Unveiling the biotransformation mechanism of indole in a Cupriavidus sp. strain.揭示贪铜菌属菌株中吲哚的生物转化机制。
Mol Microbiol. 2017 Dec;106(6):905-918. doi: 10.1111/mmi.13852. Epub 2017 Oct 23.
3
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
产抗癌化合物的海洋来源细菌sp. 菌株GMY01的基因组序列草图
Microbiol Resour Announc. 2023 Jun 20;12(6):e0136620. doi: 10.1128/mra.01366-20. Epub 2023 May 4.
4
Plastic leachates impair picophytoplankton and dramatically reshape the marine microbiome.塑料浸出物会损害微微型浮游植物，并显著改变海洋微生物组。
Microbiome. 2022 Oct 24;10(1):179. doi: 10.1186/s40168-022-01369-x.
5
Crystal structure of the ferredoxin reductase component of carbazole 1,9a-dioxygenase from Janthinobacterium sp. J3.堇青石 1,9a-二加氧酶铁氧还蛋白还原酶组分的晶体结构来自 Janthinobacterium sp. J3。
Acta Crystallogr D Struct Biol. 2021 Jul 1;77(Pt 7):921-932. doi: 10.1107/S2059798321005040. Epub 2021 Jun 18.
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
4
Evolutionary ecology of the marine Roseobacter clade.海洋玫瑰杆菌类群的进化生态学
Microbiol Mol Biol Rev. 2014 Dec;78(4):573-87. doi: 10.1128/MMBR.00020-14.
5
Complete Genome Sequence of Pseudomonas sp. Strain TKP, Isolated from a γ-Hexachlorocyclohexane-Degrading Mixed Culture.从γ-六氯环己烷降解混合培养物中分离得到的假单胞菌属菌株TKP的全基因组序列
Genome Announc. 2014 Jan 30;2(1):e01241-13. doi: 10.1128/genomeA.01241-13.
6
Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader.酸噬醋酸杆菌 KKS102 菌株的全基因组序列，一种多氯联苯降解菌。
J Bacteriol. 2012 Dec;194(24):6970-1. doi: 10.1128/JB.01848-12.
7
Thalassococcus lentus sp. nov., an alphaproteobacterium isolated from seawater of a seaweed farm.迟缓海球菌（Thalassococcus lentus）sp. nov.，一株从海藻养殖场海水分离得到的α-变形菌。
Antonie Van Leeuwenhoek. 2013 Mar;103(3):465-73. doi: 10.1007/s10482-012-9826-8. Epub 2012 Oct 16.
8
Isolation and characterization of marine bacteria capable of utilizing phthalate.利用邻苯二甲酸酯的海洋细菌的分离与鉴定。
World J Microbiol Biotechnol. 2012 Mar;28(3):1321-5. doi: 10.1007/s11274-011-0925-x. Epub 2011 Oct 26.
9
Think pink: photosynthesis, plasmids and the Roseobacter clade.想想粉色：光合作用、质粒和玫瑰杆菌群。
Environ Microbiol. 2012 Oct;14(10):2661-72. doi: 10.1111/j.1462-2920.2012.02806.x. Epub 2012 Jun 26.
10
Structural and molecular genetic analyses of the bacterial carbazole degradation system.细菌咔唑降解系统的结构与分子遗传学分析
Biosci Biotechnol Biochem. 2012;76(1):1-18. doi: 10.1271/bbb.110620. Epub 2012 Jan 7.